BLASTX nr result

ID: Bupleurum21_contig00025499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025499
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16418.3| unnamed protein product [Vitis vinifera]              277   8e-73
ref|XP_002285555.1| PREDICTED: uncharacterized protein LOC100263...   277   8e-73
emb|CAN80882.1| hypothetical protein VITISV_018651 [Vitis vinifera]   276   2e-72
ref|XP_002297790.1| predicted protein [Populus trichocarpa] gi|2...   275   5e-72
ref|XP_002304757.1| predicted protein [Populus trichocarpa] gi|2...   271   4e-71

>emb|CBI16418.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  277 bits (709), Expect = 8e-73
 Identities = 144/193 (74%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
 Frame = -3

Query: 578 SFFLSMLFLPRTTERNPYLYNDLEDTLARSNAWLTASQASGVPIVFMNIQTESLLTKISG 399
           S FLS+L LP++++R    YNDLEDTLAR+NAWLTASQ++GVP+VFMNI TESLLTKISG
Sbjct: 65  SCFLSILLLPKSSDRAASRYNDLEDTLARANAWLTASQSAGVPVVFMNIHTESLLTKISG 124

Query: 398 ETASSTVXXXXXXXXXXXXXXXL-YGFEDYHGVDIGVVRAVRLWYSPLDGEVPVEIKIKE 222
           ETASSTV                 YGFEDYHGVDIGVVRAVRLWY+PL  E P+EIKIKE
Sbjct: 125 ETASSTVNIAGSLSDLANLANASLYGFEDYHGVDIGVVRAVRLWYAPLGCEFPMEIKIKE 184

Query: 221 SDTKLGFAISRTEEGFIYISSVAESDDNAPSTRSGLCNLYKEAKKAGKLLVITRVSNQKV 42
           SDTKLGFAISRTEEGFIYISSV + DDNAPSTRSGL NLYKEA  A KLLV++RVSNQKV
Sbjct: 185 SDTKLGFAISRTEEGFIYISSVIDGDDNAPSTRSGLSNLYKEAMAASKLLVVSRVSNQKV 244

Query: 41  LPWIVSPTGAIRC 3
           LPW+VS TGAIRC
Sbjct: 245 LPWMVSSTGAIRC 257


>ref|XP_002285555.1| PREDICTED: uncharacterized protein LOC100263843 [Vitis vinifera]
          Length = 475

 Score =  277 bits (709), Expect = 8e-73
 Identities = 144/193 (74%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
 Frame = -3

Query: 578 SFFLSMLFLPRTTERNPYLYNDLEDTLARSNAWLTASQASGVPIVFMNIQTESLLTKISG 399
           S FLS+L LP++++R    YNDLEDTLAR+NAWLTASQ++GVP+VFMNI TESLLTKISG
Sbjct: 172 SCFLSILLLPKSSDRAASRYNDLEDTLARANAWLTASQSAGVPVVFMNIHTESLLTKISG 231

Query: 398 ETASSTVXXXXXXXXXXXXXXXL-YGFEDYHGVDIGVVRAVRLWYSPLDGEVPVEIKIKE 222
           ETASSTV                 YGFEDYHGVDIGVVRAVRLWY+PL  E P+EIKIKE
Sbjct: 232 ETASSTVNIAGSLSDLANLANASLYGFEDYHGVDIGVVRAVRLWYAPLGCEFPMEIKIKE 291

Query: 221 SDTKLGFAISRTEEGFIYISSVAESDDNAPSTRSGLCNLYKEAKKAGKLLVITRVSNQKV 42
           SDTKLGFAISRTEEGFIYISSV + DDNAPSTRSGL NLYKEA  A KLLV++RVSNQKV
Sbjct: 292 SDTKLGFAISRTEEGFIYISSVIDGDDNAPSTRSGLSNLYKEAMAASKLLVVSRVSNQKV 351

Query: 41  LPWIVSPTGAIRC 3
           LPW+VS TGAIRC
Sbjct: 352 LPWMVSSTGAIRC 364


>emb|CAN80882.1| hypothetical protein VITISV_018651 [Vitis vinifera]
          Length = 505

 Score =  276 bits (705), Expect = 2e-72
 Identities = 143/193 (74%), Positives = 159/193 (82%), Gaps = 1/193 (0%)
 Frame = -3

Query: 578 SFFLSMLFLPRTTERNPYLYNDLEDTLARSNAWLTASQASGVPIVFMNIQTESLLTKISG 399
           S FLS+L LP++++R    YNDLEDTLAR+NAWLTASQ++GVP+VFMNI TESLLTKISG
Sbjct: 202 SCFLSILXLPKSSDRAASRYNDLEDTLARANAWLTASQSAGVPVVFMNIHTESLLTKISG 261

Query: 398 ETASSTVXXXXXXXXXXXXXXXL-YGFEDYHGVDIGVVRAVRLWYSPLDGEVPVEIKIKE 222
           ETASSTV                 YGFEDYHGVDIGVVRAVRLWY+PL  E P+EIKIK+
Sbjct: 262 ETASSTVNIAGSLSDLANLANASLYGFEDYHGVDIGVVRAVRLWYAPLGCEFPMEIKIKD 321

Query: 221 SDTKLGFAISRTEEGFIYISSVAESDDNAPSTRSGLCNLYKEAKKAGKLLVITRVSNQKV 42
           SDTKLGFAISRTEEGFIYISSV + DDNAPSTRSGL NLYKEA  A KLLV++RVSNQKV
Sbjct: 322 SDTKLGFAISRTEEGFIYISSVIDGDDNAPSTRSGLSNLYKEAMAASKLLVVSRVSNQKV 381

Query: 41  LPWIVSPTGAIRC 3
           LPW+VS TGAIRC
Sbjct: 382 LPWMVSSTGAIRC 394


>ref|XP_002297790.1| predicted protein [Populus trichocarpa] gi|222845048|gb|EEE82595.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score =  275 bits (702), Expect = 5e-72
 Identities = 138/192 (71%), Positives = 157/192 (81%)
 Frame = -3

Query: 578 SFFLSMLFLPRTTERNPYLYNDLEDTLARSNAWLTASQASGVPIVFMNIQTESLLTKISG 399
           S FLS+L LP+ ++R    YNDLEDTLAR+NAWL ASQASGVPIVFMNIQTESLLTKISG
Sbjct: 146 SSFLSLLLLPKASDRVASRYNDLEDTLARANAWLYASQASGVPIVFMNIQTESLLTKISG 205

Query: 398 ETASSTVXXXXXXXXXXXXXXXLYGFEDYHGVDIGVVRAVRLWYSPLDGEVPVEIKIKES 219
           ETASSTV               LYGFEDYHGVD+GVVRAVRLWY+PL GE  +E+KIKE 
Sbjct: 206 ETASSTVNAGSFSDLSRLAHVSLYGFEDYHGVDLGVVRAVRLWYAPLCGEFAIEVKIKED 265

Query: 218 DTKLGFAISRTEEGFIYISSVAESDDNAPSTRSGLCNLYKEAKKAGKLLVITRVSNQKVL 39
           DTKLGFAISRTEEGFIY+SSV + DDN PSTRSGL NLYKEA  + +LLV++R+SNQKVL
Sbjct: 266 DTKLGFAISRTEEGFIYVSSVMDDDDNVPSTRSGLSNLYKEATSSSRLLVVSRLSNQKVL 325

Query: 38  PWIVSPTGAIRC 3
           PW+VS TGA++C
Sbjct: 326 PWMVSSTGAVKC 337


>ref|XP_002304757.1| predicted protein [Populus trichocarpa] gi|222842189|gb|EEE79736.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  271 bits (694), Expect = 4e-71
 Identities = 139/192 (72%), Positives = 157/192 (81%)
 Frame = -3

Query: 578 SFFLSMLFLPRTTERNPYLYNDLEDTLARSNAWLTASQASGVPIVFMNIQTESLLTKISG 399
           S FLS+L LP+ ++     YNDLEDTLAR+NAWL ASQASGV IVFMNIQTESLLTKISG
Sbjct: 150 SSFLSLLLLPKASDPVASRYNDLEDTLARANAWLHASQASGVSIVFMNIQTESLLTKISG 209

Query: 398 ETASSTVXXXXXXXXXXXXXXXLYGFEDYHGVDIGVVRAVRLWYSPLDGEVPVEIKIKES 219
           ETASSTV               LYGFEDYHGVDIGVVRAVRLWY+PL GE  +E+KI+E 
Sbjct: 210 ETASSTVNAGSLSDLSNLAHVSLYGFEDYHGVDIGVVRAVRLWYAPLCGEFAIEVKIQED 269

Query: 218 DTKLGFAISRTEEGFIYISSVAESDDNAPSTRSGLCNLYKEAKKAGKLLVITRVSNQKVL 39
           DTKLGFAISRTEEGFI+ISSV + D+NAPSTRSGL NLYKEAK A +LLV++RVSN+KVL
Sbjct: 270 DTKLGFAISRTEEGFIFISSVMDGDENAPSTRSGLSNLYKEAKSASRLLVVSRVSNEKVL 329

Query: 38  PWIVSPTGAIRC 3
           PW+VS TGA+RC
Sbjct: 330 PWMVSSTGAVRC 341


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