BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025489
         (783 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...   121   2e-25
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...   114   2e-23
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   113   5e-23
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score =  121 bits (303), Expect = 2e-25
 Identities = 66/205 (32%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
 Frame = -1

Query: 612  MNIAFHNVRGLNKAPHIEELRNFIMTNHVSLMSILETKVCKDKATFVTAKISKNWQWHFN 433
            M +   NVRG NK    +E++NF++ N   +  ++ET++  DK   +++ I K W    N
Sbjct: 518  MKLVCWNVRGCNKPFKQKEIKNFLLKNKFDMCILVETRIKADKFNKISSMIFKRWPVLNN 577

Query: 432  YDYHHYGRVWIGFDPTVWSTLLICASAQQITVDVTHIETLHNFRATFVYAFNKGAARRSL 253
            YD    GR+W+ ++PTV     I +SAQ I  +V ++ +   F    VYAFN    R+ L
Sbjct: 578  YDSAANGRIWVSWNPTVLDVKPIASSAQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKEL 637

Query: 252  WHELMGIAANTNKPWFIAGDFNCILNLGEVQGGRERWTPSMEDFLDTVSTAGLDHIRTHG 73
            W+ +   +A  ++   I GDFN +L + + + G       ++DF D +    L  +RT G
Sbjct: 638  WNFIAHTSAQNSRNLLIGGDFNNVLLVDDRRNGNPVTQHEIQDFSDCLLHNRLSEVRTIG 697

Query: 72   PIFTWSNKRS--NTINKRLDRFLAN 4
              +TW N ++  + I  ++DRF+AN
Sbjct: 698  DYYTWCNNQTSGDRIYSKIDRFIAN 722


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  114 bits (286), Expect = 2e-23
 Identities = 67/206 (32%), Positives = 107/206 (51%), Gaps = 3/206 (1%)
 Frame = -1

Query: 612  MNIAFHNVRGLNKAPHIEELRNFIMTNHVSLMSILETKVCKDKATF-VTAKISKNWQWHF 436
            M I   N+RGLN      ELR  I    ++L  ++ET+V KDK  + VT  + ++W + +
Sbjct: 806  MIIGCWNIRGLNDPIKHSELRRLIHQERIALFGLVETRV-KDKNKYNVTQLLLRSWSFLY 864

Query: 435  NYDYHHYGRVWIGFDPTVWSTLLICASAQQITVDVTHIETLHNFRATFVYAFNKGAARRS 256
            NYD+   GR+W+ ++       +   S Q I V VT + T  +F  + +Y  N  + R +
Sbjct: 865  NYDFSCRGRIWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREA 924

Query: 255  LWHELMGIAAN-TNKPWFIAGDFNCILNLGEVQGGRERWTPSMEDFLDTVSTAGLDHIRT 79
            LW +++  +    + PW + GDFN I N  +  GG   W  +M+     +  A +D +R 
Sbjct: 925  LWSDIVSRSDGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRY 984

Query: 78   HGPIFTWSNK-RSNTINKRLDRFLAN 4
             G  +TWSN+   N I ++LDR L N
Sbjct: 985  SGMHYTWSNQCPENLIMRKLDRVLVN 1010



 Score =  109 bits (273), Expect = 6e-22
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
 Frame = -1

Query: 588  RGLNKAPHIEELRNFIMTNHVSLMSILETKVCKDKATFVTAKISKNWQWHFNYDYHHYGR 409
            RGLN      ELR  I    ++L  ++ET+V       VT  + ++W + +NYD+   GR
Sbjct: 533  RGLNDPIKHSELRRLIHQERIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 408  VWIGFDPTVWSTLLICASAQQITVDVTHIETLHNFRATFVYAFNKGAARRSLWHELMGIA 229
            +W+ ++       +   S Q I V VT + T  +F  + +Y  N  + R +LW +++  +
Sbjct: 593  IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652

Query: 228  AN-TNKPWFIAGDFNCILNLGEVQGGRERWTPSMEDFLDTVSTAGLDHIRTHGPIFTWSN 52
                + PW + GDFN I N  +  GG   W  +M+     +  A +D +R  G  +TWSN
Sbjct: 653  DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTVIREAKVDDLRYSGMHYTWSN 712

Query: 51   K-RSNTINKRLDRFLAN 4
            +   N I ++LDR L N
Sbjct: 713  QCPENLIMRKLDRVLVN 729


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score =  114 bits (285), Expect = 2e-23
 Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 6/203 (2%)
 Frame = -1

Query: 594 NVRGLNKAPHIEELRNFIMTNHVSLMSILETKVCKDKATFVTAKISKNWQWHFNYDYHHY 415
           NVRG N +      R +   +     SILET+V + +A          W+   NY++   
Sbjct: 8   NVRGFNNSVRRRNFRKWFKLSKALFGSILETRVKEHRARRSLLSSFPGWKSVCNYEFAAL 67

Query: 414 GRVWIGFDPTVWSTLLICASAQQI--TVDVTHIETLHNFRATFVYAFNKGAARRSLWHEL 241
           GR+W+ +DP V  T+L   S Q I  TV + HI T   F  TFVYA N    RR LW EL
Sbjct: 68  GRIWVVWDPAVEVTVL-SKSDQTISCTVKLPHIST--EFVVTFVYAVNCRYGRRRLWSEL 124

Query: 240 MGIAAN---TNKPWFIAGDFNCILNLGEVQGGRERWTPSMEDFLDTVSTAGLDHIRTHGP 70
             +AAN   ++KPW I GDFN  L+  +   G  R T  ME+F + + T+ +  +   G 
Sbjct: 125 ELLAANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGN 184

Query: 69  IFT-WSNKRSNTINKRLDRFLAN 4
            +T W+N+ +N I K++DR L N
Sbjct: 185 HYTWWNNQENNPIAKKIDRILVN 207


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197043|gb|AAM14892.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1412

 Score =  113 bits (282), Expect = 5e-23
 Identities = 68/180 (37%), Positives = 95/180 (52%), Gaps = 10/180 (5%)
 Frame = -1

Query: 513 ILETKVCKDKATFVTAKISKNWQWHFNYDYHHYGRVWIGFDPTVWST---LLICASAQQI 343
           +LET+V + K   + AK+ K+WQ   NY+++  GR+W+     VWS+   L +   + Q+
Sbjct: 336 VLETRVIESKVPVIFAKVFKDWQMVSNYEFNRLGRIWV-----VWSSSVQLQVIFKSSQM 390

Query: 342 TVDVTHIETLH-NFRATFVYAFNKGAARRSLW---HELMGIAANTNKPWFIAGDFNCILN 175
            V +  +E     F  +F+YA N    R+ LW   H L    A  NKPW + GDFN  L 
Sbjct: 391 IVCLVRVEHYDVEFICSFIYASNFVEERKKLWQDLHNLQNSVAFRNKPWLLFGDFNETLK 450

Query: 174 LGEVQGGR--ERWTPSMEDFLDTVSTAGLDHIRTHGPIFTWSNKRS-NTINKRLDRFLAN 4
           + E          TP M DF   V    L+ +RTHGP+FTW NKR+   I K+LDR L N
Sbjct: 451 MEEHSSYAVSPMVTPGMRDFQIVVRYCSLEDMRTHGPLFTWGNKRNEGLICKKLDRVLLN 510


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
            predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  108 bits (271), Expect = 1e-21
 Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
 Frame = -1

Query: 588  RGLNKAPHIEELRNFIMTNHVSLMSILETKVCKDKATFVTAKISKNWQWHFNYDYHHYGR 409
            RGLN      ELR  I    ++L  ++ET+V       VT  + ++W + +NYD+   GR
Sbjct: 533  RGLNDPIKHSELRRLIHQKRIALFGLVETRVKDKNKDNVTQLLLRSWSFLYNYDFSCRGR 592

Query: 408  VWIGFDPTVWSTLLICASAQQITVDVTHIETLHNFRATFVYAFNKGAARRSLWHELMGIA 229
            +W+ ++       +   S Q I V VT + T  +F  + +Y  N  + R +LW +++  +
Sbjct: 593  IWVCWNADTVKVDVFGMSDQAIHVSVTILATNISFNTSIIYGDNNASLREALWSDIVSRS 652

Query: 228  AN-TNKPWFIAGDFNCILNLGEVQGGRERWTPSMEDFLDTVSTAGLDHIRTHGPIFTWSN 52
                + PW + GDFN I N  +  GG   W  +M+     +  A +D +R  G  +TWSN
Sbjct: 653  DGWESTPWILMGDFNAIRNQSDRLGGSTTWAGTMDRLDTCIREAKVDDLRYSGMHYTWSN 712

Query: 51   K-RSNTINKRLDRFLAN 4
            +   N I ++LDR L N
Sbjct: 713  QCPENLIMQKLDRVLVN 729