BLASTX nr result

ID: Bupleurum21_contig00025486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025486
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249...    62   8e-08
emb|CAN72861.1| hypothetical protein VITISV_026660 [Vitis vinifera]    62   8e-08
emb|CBI39790.3| unnamed protein product [Vitis vinifera]               57   4e-06

>ref|XP_002267683.2| PREDICTED: uncharacterized protein LOC100249836 [Vitis vinifera]
          Length = 1552

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -1

Query: 215  SYPIPLPDPMTLPSFSYTTQYNINYTGSSLEYYGQSNAEVQENNYYA-ADTNQINVPLPS 39
            +YP P   P T  +  YT QYN++Y  S+ +YYG + AEV  +++Y  A+ +Q+ +P P 
Sbjct: 1191 AYPPPPSYPETAEAVPYTGQYNLSYPDSNFDYYGHTVAEVPSSSFYGLAEGHQVAMPHPP 1250

Query: 38   LYYEAVPHAY 9
            +YY+ VP+ Y
Sbjct: 1251 VYYDTVPNVY 1260


>emb|CAN72861.1| hypothetical protein VITISV_026660 [Vitis vinifera]
          Length = 993

 Score = 62.4 bits (150), Expect = 8e-08
 Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = -1

Query: 215 SYPIPLPDPMTLPSFSYTTQYNINYTGSSLEYYGQSNAEVQENNYYA-ADTNQINVPLPS 39
           +YP P   P T  +  YT QYN++Y  S+ +YYG + AEV  +++Y  A+ +Q+ +P P 
Sbjct: 656 AYPPPPSYPETAEAVPYTGQYNLSYPDSNFDYYGHTVAEVPSSSFYGLAEGHQVAMPHPP 715

Query: 38  LYYEAVPHAY 9
           +YY+ VP+ Y
Sbjct: 716 VYYDTVPNVY 725


>emb|CBI39790.3| unnamed protein product [Vitis vinifera]
          Length = 820

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 24/61 (39%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
 Frame = -1

Query: 188 MTLPSFSYTTQYNINYTGSSLEYYGQSNAEVQENNYYA-ADTNQINVPLPSLYYEAVPHA 12
           +T  +  YT QYN++Y  S+ +YYG + AEV  +++Y  A+ +Q+ +P P +YY+ VP+ 
Sbjct: 503 LTAEAVPYTGQYNLSYPDSNFDYYGHTVAEVPSSSFYGLAEGHQVAMPHPPVYYDTVPNV 562

Query: 11  Y 9
           Y
Sbjct: 563 Y 563


Top