BLASTX nr result

ID: Bupleurum21_contig00025480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025480
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002874330.1| kelch repeat-containing F-box family protein...   100   2e-19
dbj|BAD43758.1| putative protein [Arabidopsis thaliana]                98   6e-19
gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis...    98   6e-19
ref|NP_198048.1| F-box/kelch-repeat protein [Arabidopsis thalian...    98   6e-19
ref|XP_002268943.1| PREDICTED: F-box/kelch-repeat protein At5g26...    97   1e-18

>ref|XP_002874330.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320167|gb|EFH50589.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 410

 Score =  100 bits (248), Expect = 2e-19
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 SMDLYDVEAREWLKSQXXXXXXXXXXXXXXXGYLYVLASHAVELSFWRFNGCRN--DKRY 94
           SMDL+DVE+R+WL+S+                Y+YVL+SHAVELSFWRF+  R   +  +
Sbjct: 261 SMDLFDVESRQWLRSRSVPGGGCVVAACAAVRYVYVLSSHAVELSFWRFDARRRGGNSGF 320

Query: 93  KEWRRIDAPPMPAQVRVDSSVRFSCIGIGEK 1
            EWRR+ +PP+PAQVR+D +VRFSC+G+ +K
Sbjct: 321 GEWRRLKSPPLPAQVRLDGTVRFSCVGVEDK 351


>dbj|BAD43758.1| putative protein [Arabidopsis thaliana]
          Length = 412

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 SMDLYDVEAREWLKSQXXXXXXXXXXXXXXXGYLYVLASHAVELSFWRFNGCRN--DKRY 94
           SMDL+DVE+R+WL+S+               GY+YVL SHAVELSFWRF+  R   +  +
Sbjct: 263 SMDLFDVESRQWLRSRSVPGGGCVVAACAAVGYVYVLTSHAVELSFWRFDARRRGGNSGF 322

Query: 93  KEWRRIDAPPMPAQVRVDSSVRFSCIGIGEK 1
            EW+R+ +PP+PAQVR+D +VRFSC+G+ +K
Sbjct: 323 GEWQRLKSPPLPAQVRLDGTVRFSCVGVEDK 353


>gb|AAB61064.1| contains similarity to MIPP proteins [Arabidopsis thaliana]
          Length = 704

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 SMDLYDVEAREWLKSQXXXXXXXXXXXXXXXGYLYVLASHAVELSFWRFNGCRN--DKRY 94
           SMDL+DVE+R+WL+S+               GY+YVL SHAVELSFWRF+  R   +  +
Sbjct: 264 SMDLFDVESRQWLRSRSVPGGGCVVAACAAVGYVYVLTSHAVELSFWRFDARRRGGNSGF 323

Query: 93  KEWRRIDAPPMPAQVRVDSSVRFSCIGIGEK 1
            EW+R+ +PP+PAQVR+D +VRFSC+G+ +K
Sbjct: 324 GEWQRLKSPPLPAQVRLDGTVRFSCVGVEDK 354


>ref|NP_198048.1| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|75127127|sp|Q6NPN5.1|FK113_ARATH RecName:
           Full=F-box/kelch-repeat protein At5g26960
           gi|38603834|gb|AAR24662.1| At5g26960 [Arabidopsis
           thaliana] gi|332006251|gb|AED93634.1| F-box/kelch-repeat
           protein [Arabidopsis thaliana]
          Length = 413

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/91 (50%), Positives = 64/91 (70%), Gaps = 2/91 (2%)
 Frame = -1

Query: 267 SMDLYDVEAREWLKSQXXXXXXXXXXXXXXXGYLYVLASHAVELSFWRFNGCRN--DKRY 94
           SMDL+DVE+R+WL+S+               GY+YVL SHAVELSFWRF+  R   +  +
Sbjct: 264 SMDLFDVESRQWLRSRSVPGGGCVVAACAAVGYVYVLTSHAVELSFWRFDARRRGGNSGF 323

Query: 93  KEWRRIDAPPMPAQVRVDSSVRFSCIGIGEK 1
            EW+R+ +PP+PAQVR+D +VRFSC+G+ +K
Sbjct: 324 GEWQRLKSPPLPAQVRLDGTVRFSCVGVEDK 354


>ref|XP_002268943.1| PREDICTED: F-box/kelch-repeat protein At5g26960-like [Vitis
           vinifera]
          Length = 416

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 49/94 (52%), Positives = 62/94 (65%), Gaps = 6/94 (6%)
 Frame = -1

Query: 267 SMDLYDVEAREWLKSQXXXXXXXXXXXXXXXGYLYVLASHAVELSFWRFNGCRNDKR--- 97
           SMDLYDVEAR WL+S+               G++YVL SHAVELSFWRF+  R       
Sbjct: 263 SMDLYDVEARGWLRSRAVPSGGCVVAACAAAGFVYVLTSHAVELSFWRFDARRKATSGSG 322

Query: 96  ---YKEWRRIDAPPMPAQVRVDSSVRFSCIGIGE 4
              + EW R+ +PP+PAQVR+DSSVRFSC+G+G+
Sbjct: 323 GGGFGEWCRMKSPPLPAQVRLDSSVRFSCVGVGD 356


Top