BLASTX nr result

ID: Bupleurum21_contig00025477 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025477
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|2...   324   2e-86
ref|XP_002336065.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              314   1e-83
ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|2...   308   9e-82
ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81

>ref|XP_002334494.1| predicted protein [Populus trichocarpa] gi|222872794|gb|EEF09925.1|
            predicted protein [Populus trichocarpa]
          Length = 801

 Score =  324 bits (830), Expect = 2e-86
 Identities = 166/265 (62%), Positives = 197/265 (74%), Gaps = 2/265 (0%)
 Frame = -3

Query: 791  PTYQGKKKDAHXXXXXXXXXXXXXXXXXLILTLVACFGFFYIYSKRTANLQPAD--VETN 618
            P +   KKD                    +L       FF+IY +RT  +   D  VETN
Sbjct: 439  PYFPNNKKDRDGLILVGSVFLGCSVFVNFLLVCAIFMCFFFIYRRRTKRIPQKDGAVETN 498

Query: 617  VRRFTNNELVEATNGFKEELGRGAFGIVYKGVIQMSSTILPVAVKKIDRLDQDGVKEFKT 438
            +R FT  EL EAT GFKEELGRGAFG+VYKGV+ + S+I+ VAVKK++ + +D V+EFKT
Sbjct: 499  LRCFTYQELAEATEGFKEELGRGAFGVVYKGVVHIGSSIV-VAVKKLNNVAEDRVREFKT 557

Query: 437  EVKVIAQTHHRNLVKLVGFCEEDNHRLLVYEYMVNGSLASFIFGNVKPSWALRNCIALGI 258
            EV VI QTHH+NLV+L+GFCEE + RLLVYE+M NGSL+SFIF + KP W +R  IA G+
Sbjct: 558  EVNVIGQTHHKNLVRLLGFCEEGDQRLLVYEFMSNGSLSSFIFQDAKPGWKIRIQIAFGV 617

Query: 257  ARGLAYLHNECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLMLNQSRTNTGIRGTKG 78
            ARGL YLH ECS QIIHCDIKPQNILLD+YYNARISDFGLAKLL+L+QS+T+T IRGTKG
Sbjct: 618  ARGLLYLHEECSNQIIHCDIKPQNILLDEYYNARISDFGLAKLLLLDQSQTHTAIRGTKG 677

Query: 77   YVAPEWFRINSPVTVKVDVYSFGVL 3
            YVAPEWFR N PVTVKVDVYS+GVL
Sbjct: 678  YVAPEWFR-NLPVTVKVDVYSYGVL 701


>ref|XP_002336065.1| predicted protein [Populus trichocarpa] gi|222869873|gb|EEF07004.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  317 bits (811), Expect = 2e-84
 Identities = 158/229 (68%), Positives = 186/229 (81%), Gaps = 1/229 (0%)
 Frame = -3

Query: 686 CFGFFYIYSKRTANLQPAD-VETNVRRFTNNELVEATNGFKEELGRGAFGIVYKGVIQMS 510
           CF   +IY  + AN++  + VE+N+R FT  EL EAT GFK+ELGRGAFG VYKG I+  
Sbjct: 90  CFCSSFIYRNKVANVREENNVESNLRSFTYKELTEATEGFKDELGRGAFGGVYKGAIKTG 149

Query: 509 STILPVAVKKIDRLDQDGVKEFKTEVKVIAQTHHRNLVKLVGFCEEDNHRLLVYEYMVNG 330
            T   +AVKK+D + + G KEFKTEV VI QTHH+NLV+L+GFC+E  HRLLVYE++ NG
Sbjct: 150 FTNF-IAVKKLDGVVEHGEKEFKTEVTVIGQTHHKNLVRLLGFCDEGQHRLLVYEFLSNG 208

Query: 329 SLASFIFGNVKPSWALRNCIALGIARGLAYLHNECSTQIIHCDIKPQNILLDDYYNARIS 150
           +LA F+FG+++PSW  R  IA GIARGL YLH ECSTQIIHCDIKPQNIL+DDYYNARIS
Sbjct: 209 TLADFLFGSLRPSWKQRTQIAFGIARGLLYLHEECSTQIIHCDIKPQNILIDDYYNARIS 268

Query: 149 DFGLAKLLMLNQSRTNTGIRGTKGYVAPEWFRINSPVTVKVDVYSFGVL 3
           DFGLAKLL +NQS+T T IRGTKGYVAPEWFR N+PVTVKVDVYSFGVL
Sbjct: 269 DFGLAKLLAINQSQTKTAIRGTKGYVAPEWFR-NTPVTVKVDVYSFGVL 316


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  314 bits (805), Expect = 1e-83
 Identities = 156/236 (66%), Positives = 190/236 (80%), Gaps = 2/236 (0%)
 Frame = -3

Query: 704  ILTLVACFGFFYIYSKRTANLQP--ADVETNVRRFTNNELVEATNGFKEELGRGAFGIVY 531
            +L    C    +IY K+T  ++   + +ETN+R FT  EL EATN FK+E+GRG FG+VY
Sbjct: 505  VLVGAFCLTSSFIYRKKTEKVKEGGSGLETNLRYFTYKELAEATNDFKDEVGRGGFGVVY 564

Query: 530  KGVIQMSSTILPVAVKKIDRLDQDGVKEFKTEVKVIAQTHHRNLVKLVGFCEEDNHRLLV 351
            KG IQ  ST + VAVKK+D++ QDG KEFKTEV+VI QTHH+NLV+L+GFC+E  +RLLV
Sbjct: 565  KGTIQAGSTRV-VAVKKLDKVVQDGEKEFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLV 623

Query: 350  YEYMVNGSLASFIFGNVKPSWALRNCIALGIARGLAYLHNECSTQIIHCDIKPQNILLDD 171
            YE++ NG+LA+F+FG  KP+W  R  IA GIARGL YLH EC TQIIHCDIKPQNILLD+
Sbjct: 624  YEFLSNGTLANFLFGCSKPNWKQRTQIAFGIARGLLYLHEECGTQIIHCDIKPQNILLDN 683

Query: 170  YYNARISDFGLAKLLMLNQSRTNTGIRGTKGYVAPEWFRINSPVTVKVDVYSFGVL 3
            YYNARISDFGLAKLL+++QS+T T IRGTKGYVAPEWFR N P+TVKVDVYSFGV+
Sbjct: 684  YYNARISDFGLAKLLVMDQSKTQTAIRGTKGYVAPEWFR-NRPITVKVDVYSFGVM 738


>ref|XP_002336066.1| predicted protein [Populus trichocarpa] gi|222869874|gb|EEF07005.1|
            predicted protein [Populus trichocarpa]
          Length = 691

 Score =  308 bits (789), Expect = 9e-82
 Identities = 150/209 (71%), Positives = 178/209 (85%)
 Frame = -3

Query: 629  VETNVRRFTNNELVEATNGFKEELGRGAFGIVYKGVIQMSSTILPVAVKKIDRLDQDGVK 450
            +ETN+R FT  EL EATN FK+E+GRG FG+VYKG IQ  ST + VAVKK+D++ QDG K
Sbjct: 385  LETNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRV-VAVKKLDKVVQDGEK 443

Query: 449  EFKTEVKVIAQTHHRNLVKLVGFCEEDNHRLLVYEYMVNGSLASFIFGNVKPSWALRNCI 270
            EFKTEV+VI QTHH+NLV+L+GFC+E  +RLLVYE++ NG+LA+F+FG  KP+W  R  I
Sbjct: 444  EFKTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNWKQRTQI 503

Query: 269  ALGIARGLAYLHNECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLMLNQSRTNTGIR 90
            A GIARGL YLH EC TQIIHCDIKPQNILLD+YYNARISDFGLAKLL+++QS+T T IR
Sbjct: 504  AFGIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKTQTAIR 563

Query: 89   GTKGYVAPEWFRINSPVTVKVDVYSFGVL 3
            GTKGYVAPEWFR N P+TVKVDVYSFGV+
Sbjct: 564  GTKGYVAPEWFR-NRPITVKVDVYSFGVM 591


>ref|XP_002304031.1| predicted protein [Populus trichocarpa] gi|222841463|gb|EEE79010.1|
            predicted protein [Populus trichocarpa]
          Length = 699

 Score =  306 bits (783), Expect = 4e-81
 Identities = 149/207 (71%), Positives = 176/207 (85%)
 Frame = -3

Query: 623  TNVRRFTNNELVEATNGFKEELGRGAFGIVYKGVIQMSSTILPVAVKKIDRLDQDGVKEF 444
            TN+R FT  EL EATN FK+E+GRG FG+VYKG IQ  ST + VAVKK+D++ QDG KEF
Sbjct: 391  TNLRYFTYKELAEATNDFKDEVGRGGFGVVYKGTIQAGSTRV-VAVKKLDKVVQDGEKEF 449

Query: 443  KTEVKVIAQTHHRNLVKLVGFCEEDNHRLLVYEYMVNGSLASFIFGNVKPSWALRNCIAL 264
            KTEV+VI QTHH+NLV+L+GFC+E  +RLLVYE++ NG+LA+F+FG  KP+W  R  IA 
Sbjct: 450  KTEVQVIGQTHHKNLVRLLGFCDEGQNRLLVYEFLSNGTLANFLFGCSKPNWKQRTQIAF 509

Query: 263  GIARGLAYLHNECSTQIIHCDIKPQNILLDDYYNARISDFGLAKLLMLNQSRTNTGIRGT 84
            GIARGL YLH EC TQIIHCDIKPQNILLD+YYNARISDFGLAKLL+++QS+T T IRGT
Sbjct: 510  GIARGLLYLHEECGTQIIHCDIKPQNILLDNYYNARISDFGLAKLLVMDQSKTQTAIRGT 569

Query: 83   KGYVAPEWFRINSPVTVKVDVYSFGVL 3
            KGYVAPEWFR N P+TVKVDVYSFGV+
Sbjct: 570  KGYVAPEWFR-NRPITVKVDVYSFGVM 595


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