BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025469
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   163   7e-38
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   156   7e-36
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...   150   5e-34
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...   142   1e-31
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...   142   1e-31

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  163 bits (412), Expect = 7e-38
 Identities = 94/298 (31%), Positives = 142/298 (47%), Gaps = 5/298 (1%)
 Frame = -3

Query: 985  WSKIWSLDIPHKMRVFLWRICRNNIPVRNLLKGKGVQTSIICPVCVNDVEHVVHLFLDCC 806
            W  +W+L +P K++ FLWR CRN +P R  L+ +GV  +  C +C N+ E  +HLF  C 
Sbjct: 1417 WVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCT 1476

Query: 805  FARECWKVLGLEFDTSEVEYCS----DWLLQKLQEEDKAMLARIATGLWGIWSARNLKVW 638
             +R+CW+ LGL     +    +      + + LQE D +     A  +W IW  RN  +W
Sbjct: 1477 KSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELDSSQRVIWACVMWSIWKQRNDCIW 1536

Query: 637  ENKIINPELAIQLSSKEVTQWCDVQKFRKSTSNGNLQSCQRGSVHWKPPDIGKLKVNVDA 458
             N+++            +T W + Q                    W+ PD G  K NVDA
Sbjct: 1537 RNEVMTTAAVRDRGLNLLTGWQNAQDI------------------WRKPDEGHFKCNVDA 1578

Query: 457  SVFSGRSNFSIGLVLRDHAGTFCRARTSCKVGETSVFEAEVRGVLEAIRWVIDLGVVNVE 278
            + F   +   IG+ +RD +G   +ARTS       V E E  G+L AIRW  +  + N+ 
Sbjct: 1579 AFFKESNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNIT 1638

Query: 277  IECDSMLTVQAISKDTPNFLEVGNFLRECSSLLQS-RPDVIVSFVKKQANRVAHMLAR 107
             E DS   V +      +  ++G  +REC +   S   +  V F+++QAN V H LAR
Sbjct: 1639 FELDSKRVVYSFHNTRNDVSDLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVHSLAR 1696


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
            At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  156 bits (395), Expect = 7e-36
 Identities = 97/326 (29%), Positives = 149/326 (45%), Gaps = 2/326 (0%)
 Frame = -3

Query: 1003 VQSSSGWSKIWSLDIPHKMRVFLWRICRNNIPVRNLLKGKGVQTSIICPVCVNDVEHVVH 824
            V S+  W+++W +  P K+  F WR  RN +P R  L  + V T + CP+C +++E  +H
Sbjct: 502  VDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVDTPMCCPICRSELETTLH 561

Query: 823  LFLDCCFARECWKVLGLEFDTSEVEYCSDWLLQKLQEEDKAMLARIATGLWGIWSARNLK 644
              ++C  AR+ W   GL           DWL       D  + A+     WG+W  RN  
Sbjct: 562  ALVECVAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDV 621

Query: 643  VWENKIINPELAIQLSSKEVTQWCDVQKFRKSTSNGNLQSCQRGSVHWKPPDIGKLKVNV 464
            VW  +I + +  +      +  W     F  + +     +    S  W+ PD G +K+NV
Sbjct: 622  VWNGRIWHSQQVVNGCFTMLESW-----FHANETLATAVTVPSYSSKWQKPDYGWIKINV 676

Query: 463  DASVFSGRSNFSIGLVLRDHAGTFCRARTSCKVGETSVFEAEVRGVLEAIRWVIDLGVVN 284
            D +VF  +   +IG V RDH G F          +T     E  GV E + W+ +     
Sbjct: 677  DGAVFPDKG--AIGAVFRDHQGRFMGGFAKPFPHQTLPKVVEALGVREVLSWIHERSRSR 734

Query: 283  VEIECDSMLTVQAIS-KDTPNFLEVGNFLRECSSLLQSRPDVIVSFVKKQANRVAHMLAR 107
            + +E D +  VQAI  K  PN    G  + +C  +LQ   DV V + ++ AN  AH LA 
Sbjct: 735  IVVETDCLRVVQAIQHKSCPN-TSFGFIIVDCLDVLQHLVDVQVVYARRSANSAAHCLAN 793

Query: 106  VPCE-ANCFIDFHSPPQIVLESIVYD 32
              C   +  I  ++PPQ +L  + YD
Sbjct: 794  GACSFTSLHIWGYTPPQCILSCLHYD 819


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score =  150 bits (379), Expect = 5e-34
 Identities = 102/307 (33%), Positives = 144/307 (46%), Gaps = 11/307 (3%)
 Frame = -3

Query: 991  SGWSKIWSLDIPHKMRVFLWRICRNNIPVRNLLKGKGVQTSIICPVCVNDVEHVVHLFLD 812
            S W+ IW L +P K++ FLWR CRN +P R  L+ KGVQ    C VC +  E   HLF  
Sbjct: 364  SNWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDRCAVCDDFGEDSNHLFFM 423

Query: 811  CCFARECWKVLGL------EFDTSEVEYCSD--WLLQKLQEEDKAMLARIATGLWGIWSA 656
            C  +   W+ +GL       FD + V + ++   +LQ L ++ K +    +  LW IW  
Sbjct: 424  CSKSMLYWQRIGLWSPLMAVFDIN-VSFPTNVFAILQHLDQQQKQI---FSVTLWSIWKH 479

Query: 655  RNLKVWENKIINPELAIQLSSKEVTQWCDVQKFRKSTSNGNLQSCQRGSVHWKPPDIGKL 476
            RN KVW N     +     +   +T W + Q  R  +            + W  P  G+ 
Sbjct: 480  RNNKVWNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQ---NPSTPNDLKWVKPSPGRF 536

Query: 475  KVNVDASVFSGRSNFSIGLVLRDHAGTFCRARTSCKVGETSVFEAEVRGVLEAIRWVIDL 296
              NVDAS    R+   IG+ +RD  G F  A+T        V   E  G+L A+ WV DL
Sbjct: 537  TCNVDASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPLLDVELGEALGLLSAMHWVRDL 596

Query: 295  GVVNVEIECDSMLTVQAISKDTPNFLEVGNFLRECSSLLQSRPDVIVS---FVKKQANRV 125
             +  V+ E DS   V ++   T         + EC  LL S  D++ S   F+++QAN V
Sbjct: 597  QLGIVDFELDSKSVVDSLYGSTSGVSNFSAVINECRRLLAS--DLVTSDVRFIRRQANEV 654

Query: 124  AHMLARV 104
            AH  ARV
Sbjct: 655  AHSFARV 661


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 519

 Score =  142 bits (359), Expect = 1e-31
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
 Frame = -3

Query: 985  WSKIWSLDIPHKMRVFLWRICRNNIPVRNLLKGKGVQTSIICPVCVNDVEHVVHLFLDCC 806
            WS IW L +P K++ F+WR+CR  +P RN L+ KGVQ    C  C    E V HLF  C 
Sbjct: 168  WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 227

Query: 805  FARECWKVLGL---------EFDTSEVEYCSDWLLQKLQEEDKAMLARIATGLWGIWSAR 653
            F  + W++  L          FDT+        LLQ+   E     ++I   +W +W  R
Sbjct: 228  FDVQVWQLSDLWSEIQQAVIHFDTASAVIFD--LLQRFTLEQ----SQIFVTMWSLWKRR 281

Query: 652  NLKVWENKIINPELAIQLSSKEVTQWCDVQKFRKSTS-------NGNLQSCQRGSVH--- 503
            NLKVWENK  +  + +  +   + +W      R + +       N +  + Q+  VH   
Sbjct: 282  NLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQ 341

Query: 502  ------------------WKPPDIGKLKVNVDASVFSGRSNFSIGLVLRDHAGTFCRART 377
                              W+ P  G+ K NVDA   + ++   IG+ +RD  G +  A+T
Sbjct: 342  SHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKT 401

Query: 376  SCKVGETSVFEAEVRGVLEAIRWVIDLGVVNVEIECDSMLTVQAISKDTPNFLEVGNFLR 197
                    V   E  G+  A+ W+ D+   N++   DS +T  A +    +  E G+ + 
Sbjct: 402  ISFDVVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHIIS 461

Query: 196  ECSSLLQSR-PDVIVSFVKKQANRVAHMLA 110
               SL  +   +  V F+++QAN  AH  A
Sbjct: 462  ARQSLFSTHFTNSRVEFIRRQANAAAHAFA 491


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 612

 Score =  142 bits (359), Expect = 1e-31
 Identities = 94/330 (28%), Positives = 146/330 (44%), Gaps = 38/330 (11%)
 Frame = -3

Query: 985  WSKIWSLDIPHKMRVFLWRICRNNIPVRNLLKGKGVQTSIICPVCVNDVEHVVHLFLDCC 806
            WS IW L +P K++ F+WR+CR  +P RN L+ KGVQ    C  C    E V HLF  C 
Sbjct: 261  WSDIWRLKVPPKIKNFMWRVCRGVLPTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCT 320

Query: 805  FARECWKVLGL---------EFDTSEVEYCSDWLLQKLQEEDKAMLARIATGLWGIWSAR 653
            F  + W++  L          FDT+        LLQ+   E     ++I   +W +W  R
Sbjct: 321  FDVQVWQLSDLWSEIQQAVIHFDTASAVIFD--LLQRFTLEQ----SQIFVTMWSLWKRR 374

Query: 652  NLKVWENKIINPELAIQLSSKEVTQWCDVQKFRKSTS-------NGNLQSCQRGSVH--- 503
            NLKVWENK  +  + +  +   + +W      R + +       N +  + Q+  VH   
Sbjct: 375  NLKVWENKNESCAMTVDRARVMMEEWQLATATRSAPTHQHTHLQNPSAATAQQPVVHLQQ 434

Query: 502  ------------------WKPPDIGKLKVNVDASVFSGRSNFSIGLVLRDHAGTFCRART 377
                              W+ P  G+ K NVDA   + ++   IG+ +RD  G +  A+T
Sbjct: 435  SHVASAVSAQQSLVPSISWERPSRGRFKCNVDAGFSTSKNRIGIGICVRDDDGAYVLAKT 494

Query: 376  SCKVGETSVFEAEVRGVLEAIRWVIDLGVVNVEIECDSMLTVQAISKDTPNFLEVGNFLR 197
                    V   E  G+  A+ W+ D+   N++   DS +T  A +    +  E G+ + 
Sbjct: 495  ISFDVVHPVRVGEALGLYHALEWLSDMQFDNMDFAMDSKITYDAFNSQKDDISEFGHIIS 554

Query: 196  ECSSLLQSR-PDVIVSFVKKQANRVAHMLA 110
               SL  +   +  V F+++QAN  AH  A
Sbjct: 555  ARQSLFSTHFTNSRVEFIRRQANAAAHAFA 584