BLASTX nr result

ID: Bupleurum21_contig00025454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025454
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523320.1| nucleotide binding protein, putative [Ricinu...   167   9e-40
ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   161   7e-38
emb|CBI40569.3| unnamed protein product [Vitis vinifera]              161   7e-38
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   160   9e-38
ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795...   150   9e-35

>ref|XP_002523320.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223537408|gb|EEF39036.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 2299

 Score =  167 bits (423), Expect = 9e-40
 Identities = 92/159 (57%), Positives = 110/159 (69%), Gaps = 7/159 (4%)
 Frame = +2

Query: 83  SISAVDLAGKLPLRLINSDVIPPAPTRSEYTIDWLPDFXXXXXXXXXXXXXXVISHLPSP 262
           SIS ++    LPL +I S++IPPAPTRSE TIDWLPDF              VISHLPSP
Sbjct: 7   SISTINPIDHLPLSIIGSEIIPPAPTRSESTIDWLPDFSGYAWIAYGASSLLVISHLPSP 66

Query: 263 LSDTETNVGPIFRQVFELSGSDNASGHVSGVTWS----SSGELAAALDNFIRLFSFD--- 421
           +S  E  +GPI RQVFELSG  +++  V+ V+WS    S GELAAA +N I +FS D   
Sbjct: 67  MSSDEFLIGPILRQVFELSGDHSSA--VTSVSWSSVTPSIGELAAASNNCIYVFSHDSGS 124

Query: 422 SIGSFCWSQTTALIQSTKVEAVEWTGSGDGIISVGIEVV 538
           S GSFCWSQ   L+QSTKVEA++WTGSGDGIIS GI+VV
Sbjct: 125 SKGSFCWSQNAVLVQSTKVEAIKWTGSGDGIISGGIDVV 163


>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  161 bits (407), Expect = 7e-38
 Identities = 87/159 (54%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
 Frame = +2

Query: 83  SISAVDLAGKLPLRLINSDVIPPAPTRSEYTIDWLPDFXXXXXXXXXXXXXXVISHLPSP 262
           SI+AVDL G+LPL+ + SD IPPAPT S++ +DWLPDF              VISH PSP
Sbjct: 26  SITAVDLPGQLPLQFVKSDPIPPAPTPSQFAVDWLPDFAGLSWVAYGASTLLVISHFPSP 85

Query: 263 LSDTETNVGPIFRQVFELSGSDNASGHVSGVTWS----SSGELAAALDNFIRLFSFDS-- 424
           LS  E  +GPIFRQV E++  ++A+  VS V WS    S GELA A  N + +FS DS  
Sbjct: 86  LSSEEALIGPIFRQVVEIAADESAA--VSVVGWSPATPSVGELAVASGNCVCVFSHDSER 143

Query: 425 -IGSFCWSQTTALIQSTKVEAVEWTGSGDGIISVGIEVV 538
             GSFCW QT  L+ STKVEA++WTGSGDGII+ G EVV
Sbjct: 144 AEGSFCWGQTAVLVHSTKVEAIKWTGSGDGIIAGGTEVV 182


>emb|CBI40569.3| unnamed protein product [Vitis vinifera]
          Length = 2065

 Score =  161 bits (407), Expect = 7e-38
 Identities = 87/159 (54%), Positives = 106/159 (66%), Gaps = 7/159 (4%)
 Frame = +2

Query: 83  SISAVDLAGKLPLRLINSDVIPPAPTRSEYTIDWLPDFXXXXXXXXXXXXXXVISHLPSP 262
           SI+AVDL G+LPL+ + SD IPPAPT S++ +DWLPDF              VISH PSP
Sbjct: 4   SITAVDLPGQLPLQFVKSDPIPPAPTPSQFAVDWLPDFAGLSWVAYGASTLLVISHFPSP 63

Query: 263 LSDTETNVGPIFRQVFELSGSDNASGHVSGVTWS----SSGELAAALDNFIRLFSFDS-- 424
           LS  E  +GPIFRQV E++  ++A+  VS V WS    S GELA A  N + +FS DS  
Sbjct: 64  LSSEEALIGPIFRQVVEIAADESAA--VSVVGWSPATPSVGELAVASGNCVCVFSHDSER 121

Query: 425 -IGSFCWSQTTALIQSTKVEAVEWTGSGDGIISVGIEVV 538
             GSFCW QT  L+ STKVEA++WTGSGDGII+ G EVV
Sbjct: 122 AEGSFCWGQTAVLVHSTKVEAIKWTGSGDGIIAGGTEVV 160


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
           predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  160 bits (406), Expect = 9e-38
 Identities = 89/157 (56%), Positives = 102/157 (64%), Gaps = 7/157 (4%)
 Frame = +2

Query: 89  SAVDLAGKLPLRLINSDVIPPAPTRSEYTIDWLPDFXXXXXXXXXXXXXXVISHLPSPLS 268
           ++++    LPL L  SD+IPPAPTRS  TIDWLPDF              VISHLPSPLS
Sbjct: 12  ASINPTDHLPLSLFRSDIIPPAPTRSASTIDWLPDFSGYSWVAYGASSLLVISHLPSPLS 71

Query: 269 DTETNVGPIFRQVFELSGSDNASGHVSGVTWS----SSGELAAALDNFIRLFSFDSI--- 427
             E  +GPI +QVFELS  D  S  V  V+WS    S GELAAA DN I +FS DS    
Sbjct: 72  PEEAAIGPILQQVFELSSDD--SSPVKSVSWSPVTPSIGELAAASDNCISVFSHDSASSK 129

Query: 428 GSFCWSQTTALIQSTKVEAVEWTGSGDGIISVGIEVV 538
           GSFCWSQ   L+QSTKV A+ WTGSGDGI+S GI+VV
Sbjct: 130 GSFCWSQNAMLVQSTKVGAITWTGSGDGIVSGGIDVV 166


>ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795225 [Glycine max]
          Length = 2369

 Score =  150 bits (380), Expect = 9e-35
 Identities = 82/149 (55%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
 Frame = +2

Query: 113 LPLRLINSDVIPPAPTRSEYTIDWLPDFXXXXXXXXXXXXXXVISHLPSPLSDTETNVGP 292
           LPLRL+ SD +PPAPT SE T+D+LPDF               ISH PSPLS  +T +GP
Sbjct: 13  LPLRLLRSDTVPPAPTLSESTVDFLPDFSGYSWIAYAASSLLTISHFPSPLSPHQTRIGP 72

Query: 293 IFRQVFELSGSDNASGHVSGVTWS----SSGELAAALDNFIRLFSFDSI---GSFCWSQT 451
           IFRQ F+LS        ++ V WS    SSG+LAAA DN I LF  DS    GSFCWSQ 
Sbjct: 73  IFRQSFQLSADP-----LAAVAWSPSSPSSGDLAAAADNCISLFRHDSATAKGSFCWSQN 127

Query: 452 TALIQSTKVEAVEWTGSGDGIISVGIEVV 538
             L+Q TKV  + WTGSGDGIISVG+EVV
Sbjct: 128 AVLVQHTKVANIRWTGSGDGIISVGMEVV 156


Top