BLASTX nr result

ID: Bupleurum21_contig00025439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025439
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26970.3| unnamed protein product [Vitis vinifera]              412   e-113
ref|XP_002282940.1| PREDICTED: probable elongator complex protei...   412   e-113
ref|XP_002526286.1| nucleotide binding protein, putative [Ricinu...   406   e-111
ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like ...   399   e-109
ref|XP_003536666.1| PREDICTED: elongator complex protein 2-like ...   394   e-107

>emb|CBI26970.3| unnamed protein product [Vitis vinifera]
          Length = 801

 Score =  412 bits (1059), Expect = e-113
 Identities = 197/251 (78%), Positives = 223/251 (88%), Gaps = 2/251 (0%)
 Frame = -2

Query: 765 GVESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTLPGHKASVNCTHW 586
           GVE VFIGAGCNRIVNNVSWGA +LV+FGA+N VAIFCPK AQILTTLPGHKASVNCTHW
Sbjct: 7   GVERVFIGAGCNRIVNNVSWGACDLVAFGAENGVAIFCPKAAQILTTLPGHKASVNCTHW 66

Query: 585 LPSSKFAFKAKQLERHFLLSGDAEGAIILWELTLTTRKWRFVSQVP-PHKKGVTCITAFM 409
           +PSSKFAFK KQLERH+LLSGDA+G I+LWEL+L  +KWR V QVP PHKKGVTCIT  M
Sbjct: 67  IPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADKKWRHVLQVPQPHKKGVTCITGIM 126

Query: 408 ISDTNAIFASTSSDCNVNVFELVLPSQ-GGECKFSCLDSLNVGPKSMVTLSLAELPGNTG 232
           +S+T+ IFASTSSD  +NV+EL+LPS  GG+CK S L+S+ VG KSMV LSL+ELPGNTG
Sbjct: 127 VSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESIFVGSKSMVALSLSELPGNTG 186

Query: 231 HLVLAMGGLDNKIHLYCGPKTGKFVHACDLKGHTDWIRSLDFSLPICTNGEANTLLLVSS 52
           H+VLA GGLDNK+HLYCG +TGKFVHAC+LKGHTDWIRSLDFSLPICTN   ++LLLVSS
Sbjct: 187 HVVLAAGGLDNKVHLYCGERTGKFVHACELKGHTDWIRSLDFSLPICTNDGTSSLLLVSS 246

Query: 51  SQDKGIRIWKM 19
           SQD+GIRIWKM
Sbjct: 247 SQDRGIRIWKM 257


>ref|XP_002282940.1| PREDICTED: probable elongator complex protein 2-like [Vitis
           vinifera]
          Length = 839

 Score =  412 bits (1059), Expect = e-113
 Identities = 197/251 (78%), Positives = 223/251 (88%), Gaps = 2/251 (0%)
 Frame = -2

Query: 765 GVESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTLPGHKASVNCTHW 586
           GVE VFIGAGCNRIVNNVSWGA +LV+FGA+N VAIFCPK AQILTTLPGHKASVNCTHW
Sbjct: 7   GVERVFIGAGCNRIVNNVSWGACDLVAFGAENGVAIFCPKAAQILTTLPGHKASVNCTHW 66

Query: 585 LPSSKFAFKAKQLERHFLLSGDAEGAIILWELTLTTRKWRFVSQVP-PHKKGVTCITAFM 409
           +PSSKFAFK KQLERH+LLSGDA+G I+LWEL+L  +KWR V QVP PHKKGVTCIT  M
Sbjct: 67  IPSSKFAFKEKQLERHYLLSGDADGVILLWELSLADKKWRHVLQVPQPHKKGVTCITGIM 126

Query: 408 ISDTNAIFASTSSDCNVNVFELVLPSQ-GGECKFSCLDSLNVGPKSMVTLSLAELPGNTG 232
           +S+T+ IFASTSSD  +NV+EL+LPS  GG+CK S L+S+ VG KSMV LSL+ELPGNTG
Sbjct: 127 VSETDVIFASTSSDGTINVWELILPSTIGGDCKLSFLESIFVGSKSMVALSLSELPGNTG 186

Query: 231 HLVLAMGGLDNKIHLYCGPKTGKFVHACDLKGHTDWIRSLDFSLPICTNGEANTLLLVSS 52
           H+VLA GGLDNK+HLYCG +TGKFVHAC+LKGHTDWIRSLDFSLPICTN   ++LLLVSS
Sbjct: 187 HVVLAAGGLDNKVHLYCGERTGKFVHACELKGHTDWIRSLDFSLPICTNDGTSSLLLVSS 246

Query: 51  SQDKGIRIWKM 19
           SQD+GIRIWKM
Sbjct: 247 SQDRGIRIWKM 257


>ref|XP_002526286.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223534367|gb|EEF36075.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 846

 Score =  406 bits (1044), Expect = e-111
 Identities = 197/260 (75%), Positives = 223/260 (85%), Gaps = 2/260 (0%)
 Frame = -2

Query: 774 SNCGVESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTLPGHKASVNC 595
           S   V+ VFIGAGCNR+VNNVSWGAS+LVSFGAQNAV+IFCPKTAQILTTLPGHKASVNC
Sbjct: 11  SEVEVKRVFIGAGCNRVVNNVSWGASDLVSFGAQNAVSIFCPKTAQILTTLPGHKASVNC 70

Query: 594 THWLPSSKFAFKAKQLERHFLLSGDAEGAIILWELTLTTRKWRFVSQVP-PHKKGVTCIT 418
           THW+PS+KFAF+AK L +H+LLSGDA+GAIILWEL+L  RKWR V Q+P  HKKGVTCI 
Sbjct: 71  THWIPSNKFAFRAKNLGQHYLLSGDADGAIILWELSLADRKWRQVLQLPHSHKKGVTCIA 130

Query: 417 AFMISDTNAIFASTSSDCNVNVFELVLPSQ-GGECKFSCLDSLNVGPKSMVTLSLAELPG 241
             M+S T AIFAS SSD +VN++ELVL S  GGECK SCL++L VG K MV LSLAELPG
Sbjct: 131 GIMVSQTEAIFASASSDGSVNIWELVLSSSPGGECKLSCLETLLVGSKPMVALSLAELPG 190

Query: 240 NTGHLVLAMGGLDNKIHLYCGPKTGKFVHACDLKGHTDWIRSLDFSLPICTNGEANTLLL 61
            +GH+VLAMGGLD+KIHLYCG +TGKF+HAC+LK HTDWIRSLDFSLPIC  GE N++ L
Sbjct: 191 KSGHIVLAMGGLDSKIHLYCGERTGKFIHACELKAHTDWIRSLDFSLPICMEGEGNSIFL 250

Query: 60  VSSSQDKGIRIWKMVLHNSL 1
           VSSSQDKGIRIWKM L  SL
Sbjct: 251 VSSSQDKGIRIWKMALRGSL 270


>ref|XP_003555922.1| PREDICTED: elongator complex protein 2-like [Glycine max]
          Length = 832

 Score =  399 bits (1026), Expect = e-109
 Identities = 196/261 (75%), Positives = 220/261 (84%), Gaps = 2/261 (0%)
 Frame = -2

Query: 777 MSNCGVESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTLPGHKASVN 598
           M    V+ VFIGAGCNRIVNNVSWGAS L+SFGA NAVAIFCPK+AQILTTLPGHKA VN
Sbjct: 1   MREVEVKRVFIGAGCNRIVNNVSWGASGLLSFGAHNAVAIFCPKSAQILTTLPGHKAVVN 60

Query: 597 CTHWLPSSKFAFKAKQLERHFLLSGDAEGAIILWELTLTTRKWRFVSQVP-PHKKGVTCI 421
           CTHWLPSS+F FKAKQLE+H+LLSGDA+GAIILWEL+L   KWR V Q+P  HKKGVTCI
Sbjct: 61  CTHWLPSSRFLFKAKQLEQHYLLSGDADGAIILWELSLADGKWRQVLQLPQSHKKGVTCI 120

Query: 420 TAFMISDTNAIFASTSSDCNVNVFELVLPSQG-GECKFSCLDSLNVGPKSMVTLSLAELP 244
           +  M+S T A+FASTSSD    V+EL  P  G G+CK SCLDS +VG KSMVTLSLAELP
Sbjct: 121 SGIMVSQTEAMFASTSSDGTACVWELAFPMTGSGDCKLSCLDSFSVGSKSMVTLSLAELP 180

Query: 243 GNTGHLVLAMGGLDNKIHLYCGPKTGKFVHACDLKGHTDWIRSLDFSLPICTNGEANTLL 64
           G++G +VLAMGGLDNKIHLYCG ++GKFVHAC+LKGHTDWIRSLDFSLPI  NGE N + 
Sbjct: 181 GDSGQIVLAMGGLDNKIHLYCGGRSGKFVHACELKGHTDWIRSLDFSLPISINGEVNNIF 240

Query: 63  LVSSSQDKGIRIWKMVLHNSL 1
           LVSSSQDKGIRIWKM L +S+
Sbjct: 241 LVSSSQDKGIRIWKMALRSSM 261


>ref|XP_003536666.1| PREDICTED: elongator complex protein 2-like [Glycine max]
          Length = 839

 Score =  394 bits (1012), Expect = e-107
 Identities = 194/256 (75%), Positives = 217/256 (84%), Gaps = 2/256 (0%)
 Frame = -2

Query: 762 VESVFIGAGCNRIVNNVSWGASNLVSFGAQNAVAIFCPKTAQILTTLPGHKASVNCTHWL 583
           V+ VFIGAGCNRIVNNVSWGAS L+SFGA NAVAIFCPK+AQILTTLPGHKA VNCTHWL
Sbjct: 13  VKRVFIGAGCNRIVNNVSWGASGLLSFGAHNAVAIFCPKSAQILTTLPGHKAVVNCTHWL 72

Query: 582 PSSKFAFKAKQLERHFLLSGDAEGAIILWELTLTTRKWRFVSQVP-PHKKGVTCITAFMI 406
           PSSKF FKAK LE+H+LLSGDA+GAIILWEL+L   KWR + Q+P  HKKGVTCI+  M+
Sbjct: 73  PSSKFLFKAKLLEQHYLLSGDADGAIILWELSLADGKWRQMLQLPQSHKKGVTCISGIMV 132

Query: 405 SDTNAIFASTSSDCNVNVFELVLPSQG-GECKFSCLDSLNVGPKSMVTLSLAELPGNTGH 229
           S T AIFASTSSD    V+ELV P+ G G+CK SCLDS +VG KSMV LSLAELPG++G 
Sbjct: 133 SQTEAIFASTSSDGTACVWELVFPTTGSGDCKLSCLDSFSVGSKSMVALSLAELPGDSGQ 192

Query: 228 LVLAMGGLDNKIHLYCGPKTGKFVHACDLKGHTDWIRSLDFSLPICTNGEANTLLLVSSS 49
           +VLAMGGLDNKIHLYCG +T K VHAC+LKGHTDWIRSLDFSLPI  NGE N + LVSSS
Sbjct: 193 IVLAMGGLDNKIHLYCGGRTRKLVHACELKGHTDWIRSLDFSLPISINGEVNNIFLVSSS 252

Query: 48  QDKGIRIWKMVLHNSL 1
           QDKGIRIWKM L +S+
Sbjct: 253 QDKGIRIWKMALRSSM 268


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