BLASTX nr result

ID: Bupleurum21_contig00025432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025432
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523533.1| conserved hypothetical protein [Ricinus comm...   101   5e-20
ref|XP_002324567.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_002462593.1| hypothetical protein SORBIDRAFT_02g028710 [S...    93   3e-17
ref|NP_001145235.1| uncharacterized protein LOC100278507 [Zea ma...    90   2e-16
gb|EEC84811.1| hypothetical protein OsI_31881 [Oryza sativa Indi...    85   5e-15

>ref|XP_002523533.1| conserved hypothetical protein [Ricinus communis]
           gi|223537240|gb|EEF38872.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  101 bits (252), Expect = 5e-20
 Identities = 57/135 (42%), Positives = 77/135 (57%)
 Frame = -3

Query: 410 IAFTTPENYAGRLSATIHQKGWTPLWCXXXXXXXXXXXIHHFLTNSPNQSKTPLDHYSAI 231
           +AFTTP+NYA RLS  +  K  TPLWC           +     +    S +P+   SAI
Sbjct: 18  VAFTTPQNYASRLSHLLTLKSLTPLWCPTIITQPTPQTLSSLALHLAPHSISPI---SAI 74

Query: 230 AFTSRTGISSFSQALSLINTHPLSPIGPPFTLSALGKDSELLDYTFLSKMCKNPDRIRVL 51
            F SRT I++FS+A+  + T  L P      + ALGKD+EL+D  FL  +C + +RIR L
Sbjct: 75  LFPSRTAITAFSKAICSLATPLLHPSHDAMIIGALGKDAELIDSAFLLNICSSINRIRAL 134

Query: 50  IPPVASPSGTVDSLG 6
           +P  A+PSG V SLG
Sbjct: 135 VPQTATPSGLVQSLG 149


>ref|XP_002324567.1| predicted protein [Populus trichocarpa] gi|222866001|gb|EEF03132.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 62/155 (40%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
 Frame = -3

Query: 437 TNIFSDHRVIAFTTPENYAGRLSATIHQKGWTPLWCXXXXXXXXXXXIHHFLTNSPNQ-- 264
           T I ++   +AFTTP NYA RLS  +  K +TPLWC               +T  P Q  
Sbjct: 12  TTITTNKPTVAFTTPPNYATRLSHLLTLKSFTPLWCPT-------------ITTEPTQQT 58

Query: 263 --------SKTPLDHYSAIAFTSRTGISSFSQALSLINTHPLSPIGPPFTLSALGKDSEL 108
                   S   L   SAIAF SRT I++FS A   + T  L P    F ++ALGKD EL
Sbjct: 59  LSSLALHLSPHSLSLLSAIAFPSRTAITAFSTAALSLTTPLLPPREDTFIIAALGKDVEL 118

Query: 107 LDYTFLSKMCKNP-DRIRVLIPPVASPSGTVDSLG 6
           +D TFL   C +    + VL+P +A+PSG V  LG
Sbjct: 119 IDSTFLLTFCGDDISWVNVLVPTIATPSGLVQLLG 153


>ref|XP_002462593.1| hypothetical protein SORBIDRAFT_02g028710 [Sorghum bicolor]
           gi|241925970|gb|EER99114.1| hypothetical protein
           SORBIDRAFT_02g028710 [Sorghum bicolor]
          Length = 299

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 58/145 (40%), Positives = 85/145 (58%), Gaps = 8/145 (5%)
 Frame = -3

Query: 416 RVIAFTTPEN-----YAGRLSATIHQKGWTPLWCXXXXXXXXXXXIHHFLTNSPNQSKTP 252
           R +AFTTP+      Y GRL A + Q+G  P+              H      P      
Sbjct: 14  RRVAFTTPQTGGGGAYGGRLGALLRQRGAHPV-----PVPTIAVHPHDPDRLRPFLLPGA 68

Query: 251 LDHYSAIAFTSRTGISSFSQALSLINTHPLSPIGP-PFTLSALGKDSELLDYTFLSKMC- 78
           LD ++A+AFTSR+GIS+F++ALS  + HPL+     PFT++ALG D++LLD+ FLS++C 
Sbjct: 69  LDPFAALAFTSRSGISAFARALSSSSHHPLADASALPFTVAALGSDADLLDHAFLSRLCG 128

Query: 77  -KNPDRIRVLIPPVASPSGTVDSLG 6
                R+ VL+P V +P+G V++LG
Sbjct: 129 AAAGTRVSVLVPDVPTPAGLVEALG 153


>ref|NP_001145235.1| uncharacterized protein LOC100278507 [Zea mays]
           gi|195653353|gb|ACG46144.1| hypothetical protein [Zea
           mays] gi|414589847|tpg|DAA40418.1| TPA: hypothetical
           protein ZEAMMB73_114348 [Zea mays]
          Length = 297

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 58/144 (40%), Positives = 86/144 (59%), Gaps = 7/144 (4%)
 Frame = -3

Query: 416 RVIAFTTPEN-----YAGRLSATIHQKGWTPLWCXXXXXXXXXXXIHHFLTNSPNQSKTP 252
           R +AFTTP+      Y GRL A + Q+G  P+              H      P    + 
Sbjct: 14  RRVAFTTPQTGGGGAYGGRLGALLRQRGAHPV-----AVPTIAVHPHDPDRLRPYLLPSA 68

Query: 251 LDHYSAIAFTSRTGISSFSQALSLINTHPLSPIGP-PFTLSALGKDSELLDYTFLSKMCK 75
           LD ++A+AFTSR+GIS+F++ALS  +  PLS     PFT++ALG D++LLD+ FLS++C 
Sbjct: 69  LDPFAALAFTSRSGISAFARALSSSH-RPLSHASALPFTVAALGSDADLLDHAFLSRLCG 127

Query: 74  NP-DRIRVLIPPVASPSGTVDSLG 6
           +   R+ VL+P V +P+G V++LG
Sbjct: 128 DAGTRVSVLVPDVPTPAGLVEALG 151


>gb|EEC84811.1| hypothetical protein OsI_31881 [Oryza sativa Indica Group]
          Length = 301

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 17/154 (11%)
 Frame = -3

Query: 416 RVIAFTTPEN------YAGRLSATIHQKGWTPLWCXXXXXXXXXXXIHHFLTNSPNQSKT 255
           R +AFTTP+       Y GRL A + Q+G  P+              H      P  +  
Sbjct: 12  RRVAFTTPQTDAGGGGYGGRLHAILRQRGARPV-----PVPTIAIRAHDPDILRPFVAPG 66

Query: 254 PLDHYSAIAFTSRTGISSFSQALSLINT--------HPLSPIGP--PFTLSALGKDSELL 105
            LD ++A+AFTSR+GIS+FS+AL   ++        HP+S      PFT++ALG D++LL
Sbjct: 67  GLDAFAALAFTSRSGISAFSRALLPSSSSSPARRPRHPVSDAATALPFTVAALGSDADLL 126

Query: 104 DYTFLSKMCKNP-DRIRVLIPPVASPSGTVDSLG 6
           D  FLS++C +   R+ VL+P V +P+G V++LG
Sbjct: 127 DAAFLSRLCGDAGGRVSVLVPDVPTPAGLVEALG 160


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