BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025422
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    66   2e-13
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    73   1e-10
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    58   4e-08
gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold ...    63   8e-08
gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold ...    63   8e-08

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
            gi|223541858|gb|EEF43404.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 668

 Score = 65.9 bits (159), Expect(2) = 2e-13
 Identities = 48/207 (23%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
 Frame = +2

Query: 248  DRSGHYMIKSAYSLIQDIKCDIHACDNSGYWRNLWNLKISLNV*AFSVEGIYVVLTNKRS 427
            D  G+Y++K+ Y L+Q    D+   + S +W   W LKI   V     +     +    +
Sbjct: 402  DDKGNYLVKNCYRLLQG---DLGRPETS-FWNKFWKLKIPTKVRNLMWKICSNCIRTAMN 457

Query: 428  TKNKKGGC*RYMPTCNDHVDSVMHVIVECSFAKTYWDRICVKLSLSTCDSFHA*LDSIFI 607
             + +          CN   +++ HV+  CS A+  WD +  + S  T     + + + FI
Sbjct: 458  LRMRYVDLDPLCKWCNREPETLFHVLFGCSMARECWDLLGFRFSFPTESPICSWIQNFFI 517

Query: 608  QHQGDMLGLIVVMWW*SLWKHRNELVWN*RSMEVDELVESGKSIFNRWRNAQ--DKQLDT 781
             +  D    + ++   SLW  RN  VWN +S     ++     +  +   AQ  D+++  
Sbjct: 518  DNHEDTCAKMALVCG-SLWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAP 576

Query: 782  TLAYMT*GDGDEHWNVPNVDTVEVNID 862
             L + T  D    W  P +  +++N D
Sbjct: 577  PLGHNT--DVTRKWTKPELGWLKINTD 601



 Score = 35.8 bits (81), Expect(2) = 2e-13
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 54  VNEALKDKKVSSLVITWLN*WDTDLINDIFDERDANLILAIPLQNTTSSLMITWL 218
           + E L+D  V+ ++      WD D++ D+F+ RD  LI +IPL N        WL
Sbjct: 346 IPEGLEDATVAGILQINERRWDGDILVDLFNGRDKRLIESIPLTNRNVEDSWYWL 400


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score = 72.8 bits (177), Expect = 1e-10
 Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 11/237 (4%)
 Frame = +2

Query: 188 HDLFSNDHMANLISNIITR-----------KDRSGHYMIKSAYSLIQDIKCDIHACDNSG 334
           +DLFS +   NLI++I+             KD  G + +K  Y  +Q     +    N  
Sbjct: 125 NDLFS-ERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSVKDVYR-VQQPDFSVLYPSNVV 182

Query: 335 YWRNLWNLKISLNV*AFSVEGIYVVLTNKRSTKNKKGGC*RYMPTCNDHVDSVMHVIVEC 514
            WR LW L I+     F    +   L  + +   +K       P C    +++MH++V C
Sbjct: 183 VWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIMHILVLC 242

Query: 515 SFAKTYWDRICVKLSLSTCDSFHA*LDSIFIQHQGDMLGLIVVMWW*SLWKHRNELVWN* 694
                 W  + +   LS   +      S+F      ++   VV+WW SLW + N++VWN 
Sbjct: 243 DVTTQSWKYVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWW-SLWTNMNDVVWNG 301

Query: 695 RSMEVDELVESGKSIFNRWRNAQDKQLDTTLAYMT*GDGDEHWNVPNVDTVEVNIDA 865
           + +    +     S   +W  A+ K  D          GD  W  P     ++N+DA
Sbjct: 302 KKLSWRAVASRASSFLFQWGKAR-KLTDYHQLGRHFAGGDCLWQKPATGKYKLNVDA 357


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 58.2 bits (139), Expect(2) = 4e-08
 Identities = 52/203 (25%), Positives = 77/203 (37%), Gaps = 5/203 (2%)
 Frame = +2

Query: 272 KSAYSLIQDIKCDIHACDNSGYWRNLWNLKISLNV*AFSVEGIYVVLTNKRSTKNKKGGC 451
           KSAY  I +    I        W  +W LK+   V  F        L  +   ++K   C
Sbjct: 344 KSAYKDILNHDMTIVQHRVPSNWNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQC 403

Query: 452 *RYMPTCNDHVDSVMHVIVECSFAKTYWDRICVKLSLSTCDSFHA*LDS---IFIQHQGD 622
                 C+D  +   H+   CS +  YW RI +   L      +    +     +QH   
Sbjct: 404 IDRCAVCDDFGEDSNHLFFMCSKSMLYWQRIGLWSPLMAVFDINVSFPTNVFAILQHLDQ 463

Query: 623 MLGLI--VVMWW*SLWKHRNELVWN*RSMEVDELVESGKSIFNRWRNAQDKQLDTTLAYM 796
               I  V +W  S+WKHRN  VWN  +    ++     S+   WRNAQ+ +  +     
Sbjct: 464 QQKQIFSVTLW--SIWKHRNNKVWNNITDTAQDICARAGSLLTSWRNAQNIRHPSPQNPS 521

Query: 797 T*GDGDEHWNVPNVDTVEVNIDA 865
           T    D  W  P+      N+DA
Sbjct: 522 T--PNDLKWVKPSPGRFTCNVDA 542



 Score = 25.8 bits (55), Expect(2) = 4e-08
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +3

Query: 81  VSSLVITWLN*WDTDLINDIFDERDANLILAIPLQNTTSSLM 206
           VS L+IT    W+ +LIN  FD   A  I  +  ++    ++
Sbjct: 310 VSDLLITPEKQWNVELINTFFDSSIARNIFTLRFKSAYKDIL 351


>gb|ABN06084.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 519

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
 Frame = +2

Query: 233 IITRKDRSGHYMIKSAYSLIQDIKCDIHACDNSGYWRNLWNLKISLNV*AFSVEGIYVVL 412
           II + +  G Y ++SAY+L  +   D       GYW ++W LK+   +  F       VL
Sbjct: 133 IIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVL 192

Query: 413 TNKRSTKNKKGGC*RYMPTCNDHVDSVMHVIVECSFAKTYWDRIC----VKLSLSTCDSF 580
             +   ++K   C      C+   + V H+   C+F    W        ++ ++   D+ 
Sbjct: 193 PTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTA 252

Query: 581 HA*LDSIFIQHQGDMLGLIVVMWW*SLWKHRNELVWN*RSMEVDELVESGKSIFNRWRNA 760
            A +  +  +   +   + V MW  SLWK RN  VW  ++      V+  + +   W+ A
Sbjct: 253 SAVIFDLLQRFTLEQSQIFVTMW--SLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLA 310


>gb|ABD32189.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 612

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
 Frame = +2

Query: 233 IITRKDRSGHYMIKSAYSLIQDIKCDIHACDNSGYWRNLWNLKISLNV*AFSVEGIYVVL 412
           II + +  G Y ++SAY+L  +   D       GYW ++W LK+   +  F       VL
Sbjct: 226 IIWKAENDGKYSVRSAYTLCVEELIDTSFLRRPGYWSDIWRLKVPPKIKNFMWRVCRGVL 285

Query: 413 TNKRSTKNKKGGC*RYMPTCNDHVDSVMHVIVECSFAKTYWDRIC----VKLSLSTCDSF 580
             +   ++K   C      C+   + V H+   C+F    W        ++ ++   D+ 
Sbjct: 286 PTRNKLRDKGVQCPEACVNCSTTSEDVKHLFCVCTFDVQVWQLSDLWSEIQQAVIHFDTA 345

Query: 581 HA*LDSIFIQHQGDMLGLIVVMWW*SLWKHRNELVWN*RSMEVDELVESGKSIFNRWRNA 760
            A +  +  +   +   + V MW  SLWK RN  VW  ++      V+  + +   W+ A
Sbjct: 346 SAVIFDLLQRFTLEQSQIFVTMW--SLWKRRNLKVWENKNESCAMTVDRARVMMEEWQLA 403