BLASTX nr result

ID: Bupleurum21_contig00025419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025419
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera]    69   6e-10
ref|XP_002516970.1| chaperone binding protein, putative [Ricinus...    69   7e-10
ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255...    68   1e-09
ref|NP_188298.3| tetratricopeptide repeat domain-containing prot...    67   3e-09
dbj|BAB02768.1| unnamed protein product [Arabidopsis thaliana]         67   3e-09

>emb|CAN69220.1| hypothetical protein VITISV_012016 [Vitis vinifera]
          Length = 532

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 38/75 (50%), Positives = 45/75 (60%)
 Frame = +3

Query: 351 PKTTPSWQPNKPSWTHQPAPPSQSVLPGSLSGPTSMVGDITGRSWAAVPPAKTAASXXXX 530
           P++ P WQPNKPSWTHQPA P+Q+   GS +GP SMVGDI G+SWA  P   +       
Sbjct: 53  PQSHP-WQPNKPSWTHQPA-PTQTTRSGSSNGPGSMVGDIFGKSWAPSPGPSSGIG---- 106

Query: 531 XXXXXXXXXLFGDLV 575
                    LFGDLV
Sbjct: 107 --IVDKNPNLFGDLV 119


>ref|XP_002516970.1| chaperone binding protein, putative [Ricinus communis]
           gi|223544058|gb|EEF45584.1| chaperone binding protein,
           putative [Ricinus communis]
          Length = 508

 Score = 68.6 bits (166), Expect = 7e-10
 Identities = 37/74 (50%), Positives = 46/74 (62%)
 Frame = +3

Query: 354 KTTPSWQPNKPSWTHQPAPPSQSVLPGSLSGPTSMVGDITGRSWAAVPPAKTAASXXXXX 533
           ++ P+WQ NKPSWTHQPA PSQS  PG L+GP+SMVGDI+G+SW ++             
Sbjct: 51  QSKPAWQSNKPSWTHQPA-PSQSTRPG-LNGPSSMVGDISGKSWNSM-----GVGSGSGL 103

Query: 534 XXXXXXXXLFGDLV 575
                   LFGDLV
Sbjct: 104 GIVEKSPNLFGDLV 117


>ref|XP_002272460.2| PREDICTED: uncharacterized protein LOC100255130 [Vitis vinifera]
          Length = 496

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/75 (49%), Positives = 44/75 (58%)
 Frame = +3

Query: 351 PKTTPSWQPNKPSWTHQPAPPSQSVLPGSLSGPTSMVGDITGRSWAAVPPAKTAASXXXX 530
           P++ P WQPNKPSWTHQPA P+Q+   G  +GP SMVGDI G+SWA  P   +       
Sbjct: 53  PQSHP-WQPNKPSWTHQPA-PTQTTRSGPSNGPASMVGDIFGKSWAPSPGPSSGIG---- 106

Query: 531 XXXXXXXXXLFGDLV 575
                    LFGDLV
Sbjct: 107 --IVDKNPNLFGDLV 119


>ref|NP_188298.3| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|332642340|gb|AEE75861.1| tetratricopeptide
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 456

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/71 (46%), Positives = 40/71 (56%)
 Frame = +3

Query: 363 PSWQPNKPSWTHQPAPPSQSVLPGSLSGPTSMVGDITGRSWAAVPPAKTAASXXXXXXXX 542
           P+WQP KPSWTHQPAP   ++     SGPTSMVGDI G++W       +A+         
Sbjct: 49  PAWQPGKPSWTHQPAPKQSTIRSEIGSGPTSMVGDIHGKTWG------SASGSGSGIGIV 102

Query: 543 XXXXXLFGDLV 575
                LFGDLV
Sbjct: 103 NKDPSLFGDLV 113


>dbj|BAB02768.1| unnamed protein product [Arabidopsis thaliana]
          Length = 400

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 33/71 (46%), Positives = 40/71 (56%)
 Frame = +3

Query: 363 PSWQPNKPSWTHQPAPPSQSVLPGSLSGPTSMVGDITGRSWAAVPPAKTAASXXXXXXXX 542
           P+WQP KPSWTHQPAP   ++     SGPTSMVGDI G++W       +A+         
Sbjct: 49  PAWQPGKPSWTHQPAPKQSTIRSEIGSGPTSMVGDIHGKTWG------SASGSGSGIGIV 102

Query: 543 XXXXXLFGDLV 575
                LFGDLV
Sbjct: 103 NKDPSLFGDLV 113


Top