BLASTX nr result

ID: Bupleurum21_contig00025414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025414
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|2...   146   1e-33
ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Gl...   142   3e-32
ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycin...   141   5e-32
ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis] gi...   141   5e-32
ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32

>ref|XP_002298767.1| predicted protein [Populus trichocarpa] gi|222846025|gb|EEE83572.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  146 bits (369), Expect = 1e-33
 Identities = 70/95 (73%), Positives = 79/95 (83%)
 Frame = -2

Query: 286 GVIAWYLEMIKSRPILTKSITSAIIYTVADFSSQKIVSSSSAPYDVVRTLRMAGYGMLIL 107
           G I WYL M+KSRPILTKS TS++IY  AD SSQ I   SS PYD+VRTLRMAGYG+LI+
Sbjct: 13  GFIGWYLGMVKSRPILTKSATSSLIYIAADLSSQTISLPSSEPYDLVRTLRMAGYGLLIV 72

Query: 106 GPSLHFWFNFVSKTLPKRDLLTTVTKIVMGQTLYG 2
           GPSLHFWF FVSK LPKRDL+TT  KI+MGQT+YG
Sbjct: 73  GPSLHFWFKFVSKLLPKRDLITTFKKILMGQTIYG 107


>ref|XP_003555983.1| PREDICTED: PXMP2/4 family protein 4-like [Glycine max]
          Length = 250

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/95 (70%), Positives = 79/95 (83%)
 Frame = -2

Query: 286 GVIAWYLEMIKSRPILTKSITSAIIYTVADFSSQKIVSSSSAPYDVVRTLRMAGYGMLIL 107
           G ++WYL MIKS PILTKS+TS++IY  AD SSQ IV  SS P+D VRT RMAGYG++IL
Sbjct: 74  GFVSWYLGMIKSWPILTKSVTSSLIYIAADLSSQTIVRESSEPFDFVRTSRMAGYGIVIL 133

Query: 106 GPSLHFWFNFVSKTLPKRDLLTTVTKIVMGQTLYG 2
           GPSLHFWFNFVSK  P+RDL +T+ K+VMGQTLYG
Sbjct: 134 GPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYG 168


>ref|NP_001242024.1| uncharacterized protein LOC100810534 [Glycine max]
           gi|255639865|gb|ACU20225.1| unknown [Glycine max]
          Length = 248

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/95 (69%), Positives = 77/95 (81%)
 Frame = -2

Query: 286 GVIAWYLEMIKSRPILTKSITSAIIYTVADFSSQKIVSSSSAPYDVVRTLRMAGYGMLIL 107
           G + WYL MIKS PILTKS+TS++IY   D SSQ IV  SS P+D +RT RMAGYGM+IL
Sbjct: 72  GFVGWYLGMIKSWPILTKSVTSSLIYIATDLSSQTIVRESSEPFDFIRTSRMAGYGMVIL 131

Query: 106 GPSLHFWFNFVSKTLPKRDLLTTVTKIVMGQTLYG 2
           GPSLHFWFNFVSK  P+RDL +T+ K+VMGQTLYG
Sbjct: 132 GPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYG 166


>ref|XP_002527492.1| Protein SYM1, putative [Ricinus communis]
           gi|223533132|gb|EEF34890.1| Protein SYM1, putative
           [Ricinus communis]
          Length = 268

 Score =  141 bits (356), Expect = 5e-32
 Identities = 64/93 (68%), Positives = 76/93 (81%)
 Frame = -2

Query: 280 IAWYLEMIKSRPILTKSITSAIIYTVADFSSQKIVSSSSAPYDVVRTLRMAGYGMLILGP 101
           + WYL M+K+RPILTKS T A+IY  AD SSQ I    S PYD+VRTLRMAGYGML+LGP
Sbjct: 91  VGWYLGMVKTRPILTKSATCAVIYVAADLSSQTIARPVSEPYDLVRTLRMAGYGMLVLGP 150

Query: 100 SLHFWFNFVSKTLPKRDLLTTVTKIVMGQTLYG 2
           +LHFWFNFVS+  PKRDL+TT  KI++GQT+YG
Sbjct: 151 TLHFWFNFVSRQFPKRDLITTFKKIILGQTVYG 183


>ref|XP_002313168.1| predicted protein [Populus trichocarpa] gi|222849576|gb|EEE87123.1|
           predicted protein [Populus trichocarpa]
          Length = 184

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/95 (68%), Positives = 77/95 (81%)
 Frame = -2

Query: 286 GVIAWYLEMIKSRPILTKSITSAIIYTVADFSSQKIVSSSSAPYDVVRTLRMAGYGMLIL 107
           G + WYL M+KSRP+LTKS TS++IY  AD SSQ +   SS  YD+VR LRMAGYG+LI+
Sbjct: 13  GFVGWYLGMVKSRPVLTKSATSSLIYIAADLSSQTMSLPSSEAYDLVRILRMAGYGLLII 72

Query: 106 GPSLHFWFNFVSKTLPKRDLLTTVTKIVMGQTLYG 2
           GPSLHFWFNFVSK  PKRDL+TT  KI+MGQT+YG
Sbjct: 73  GPSLHFWFNFVSKLFPKRDLITTFKKIIMGQTIYG 107


Top