BLASTX nr result

ID: Bupleurum21_contig00025408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025408
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329315.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_003555078.1| PREDICTED: uncharacterized protein LOC100527...    84   1e-14
ref|XP_003541233.1| PREDICTED: uncharacterized protein LOC100805...    82   3e-14
ref|XP_002888581.1| hypothetical protein ARALYDRAFT_475817 [Arab...    62   5e-08
dbj|BAD94252.1| hypothetical protein [Arabidopsis thaliana] gi|9...    61   1e-07

>ref|XP_002329315.1| predicted protein [Populus trichocarpa] gi|222870769|gb|EEF07900.1|
           predicted protein [Populus trichocarpa]
          Length = 65

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/67 (68%), Positives = 55/67 (82%)
 Frame = -3

Query: 228 MGFGRLMVSLKSKIRCLKTKKAAVDLYDKIEKSESMRVEIRSRKAQKLIQQTLKVADSPH 49
           MG G L+++LKSKIR LK KK     YDKIEKS+SMRVEIRSRKA+KL+++TLK+ADSP 
Sbjct: 4   MGLGSLVMNLKSKIRSLKMKKP----YDKIEKSDSMRVEIRSRKARKLVEETLKIADSPK 59

Query: 48  INKTYAF 28
             KTYAF
Sbjct: 60  -TKTYAF 65


>ref|XP_003555078.1| PREDICTED: uncharacterized protein LOC100527519 [Glycine max]
           gi|255632530|gb|ACU16615.1| unknown [Glycine max]
          Length = 64

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/67 (70%), Positives = 55/67 (82%)
 Frame = -3

Query: 228 MGFGRLMVSLKSKIRCLKTKKAAVDLYDKIEKSESMRVEIRSRKAQKLIQQTLKVADSPH 49
           MG GRLMV+LKSKIR LK  K     YDK+EKSESMR+EIRSRKA+KLI++TLKVADSP 
Sbjct: 1   MGLGRLMVTLKSKIRSLKIMKKPD--YDKVEKSESMRMEIRSRKARKLIEETLKVADSPK 58

Query: 48  INKTYAF 28
            +K +AF
Sbjct: 59  -SKAFAF 64


>ref|XP_003541233.1| PREDICTED: uncharacterized protein LOC100805982 [Glycine max]
          Length = 64

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 47/67 (70%), Positives = 54/67 (80%)
 Frame = -3

Query: 228 MGFGRLMVSLKSKIRCLKTKKAAVDLYDKIEKSESMRVEIRSRKAQKLIQQTLKVADSPH 49
           MG GRLMV+LKSKIR LK  K     YDK+EKSESMR+EIRSRKA+KLI++TLKVADSP 
Sbjct: 1   MGLGRLMVTLKSKIRSLKILKKPD--YDKVEKSESMRMEIRSRKARKLIEETLKVADSPK 58

Query: 48  INKTYAF 28
             K +AF
Sbjct: 59  -PKAFAF 64


>ref|XP_002888581.1| hypothetical protein ARALYDRAFT_475817 [Arabidopsis lyrata subsp.
           lyrata] gi|297334422|gb|EFH64840.1| hypothetical protein
           ARALYDRAFT_475817 [Arabidopsis lyrata subsp. lyrata]
          Length = 84

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 14/81 (17%)
 Frame = -3

Query: 228 MGFGRLMVSLKSKIRC-LKTKK-------------AAVDLYDKIEKSESMRVEIRSRKAQ 91
           M  G+++  LKSKI+  L+ +K             ++   Y+KIEKSESMR E+RSRKA 
Sbjct: 5   MRLGKIVEGLKSKIKTGLRMRKRSSLSSSSSSSSSSSSSSYEKIEKSESMRFELRSRKAH 64

Query: 90  KLIQQTLKVADSPHINKTYAF 28
           K+I++TL++ADSP  ++TYAF
Sbjct: 65  KIIKETLQIADSP-TSRTYAF 84


>dbj|BAD94252.1| hypothetical protein [Arabidopsis thaliana]
           gi|98961949|gb|ABF59304.1| unknown protein [Arabidopsis
           thaliana]
          Length = 88

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 18/85 (21%)
 Frame = -3

Query: 228 MGFGRLMVSLKSKIRC-LKTKK-----------------AAVDLYDKIEKSESMRVEIRS 103
           M  G+++  LKSKI+  L+ +K                 ++   Y+KIEKSESMR E+RS
Sbjct: 5   MRLGKIVEGLKSKIKTGLRMRKRSSLSSSSYSSSSSSSSSSSSSYEKIEKSESMRFELRS 64

Query: 102 RKAQKLIQQTLKVADSPHINKTYAF 28
           +KA K+IQ+TL++ADSP  ++TYAF
Sbjct: 65  KKAHKIIQETLQIADSP-TSRTYAF 88


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