BLASTX nr result

ID: Bupleurum21_contig00025377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025377
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x...   333   2e-89
ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinu...   333   2e-89
ref|XP_002317151.1| predicted protein [Populus trichocarpa] gi|2...   332   4e-89
gb|ABK93112.1| unknown [Populus trichocarpa]                          332   4e-89
gb|AAV49801.1| homeobox transcription factor KN2 [Populus tricho...   332   4e-89

>gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x Populus alba]
          Length = 361

 Score =  333 bits (855), Expect = 2e-89
 Identities = 172/235 (73%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
 Frame = -1

Query: 700 TATFTGCYLMXXXXXXXXXXXXXXXXXXXXXXXSVKAKIMSHPHYPRLLAAYVNCQKIGA 521
           T T TGCY M                        VKAKIM+HPHY RLLAAY NCQK+GA
Sbjct: 90  TVTATGCYFMDNNDGSSSS---------------VKAKIMAHPHYHRLLAAYANCQKVGA 134

Query: 520 PPEVVARLEEAYVSVAXXXXXXXXSIGEDPALDQFMEAYCEMLTKYEQELAKPFKEAMLF 341
           PPEVVARLEEA  S A         IGEDPALDQFMEAYCEMLTKYEQEL+KP KEAMLF
Sbjct: 135 PPEVVARLEEACASAASMAPANTGCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLF 194

Query: 340 LSKIESQFKALTVSS--SGLPDAADRNASSEEEVDVNNSLIDPQAEDRELKGQLLRKYSG 167
           L ++E QFKALTVSS  SG  D  DRN SSEEEVDVNN+ IDPQAED+ELKGQLLR+YSG
Sbjct: 195 LQRVECQFKALTVSSPISGCGDGNDRNVSSEEEVDVNNNFIDPQAEDQELKGQLLRRYSG 254

Query: 166 YLGNLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKVALAESTGLDQ 2
           YLG+LKQEFMKKRKKGKLPKEARQQLL+WWSRHYKWPYPSESQK+ALAESTGLDQ
Sbjct: 255 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQ 309


>ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinus communis]
           gi|223542265|gb|EEF43807.1| homeobox protein knotted-1,
           putative [Ricinus communis]
          Length = 353

 Score =  333 bits (854), Expect = 2e-89
 Identities = 164/201 (81%), Positives = 179/201 (89%), Gaps = 2/201 (0%)
 Frame = -1

Query: 598 VKAKIMSHPHYPRLLAAYVNCQKIGAPPEVVARLEEAYVSVAXXXXXXXXSIGEDPALDQ 419
           VKAKIM+HPHY RLLAAY+NCQK+GAPPEVV RLEEA  S A         IGEDPALDQ
Sbjct: 101 VKAKIMAHPHYHRLLAAYINCQKVGAPPEVVTRLEEACASAATMGQAGTSCIGEDPALDQ 160

Query: 418 FMEAYCEMLTKYEQELAKPFKEAMLFLSKIESQFKALTVSS--SGLPDAADRNASSEEEV 245
           FMEAYCEMLTKYEQEL+KPFKEAMLFL ++E QFKALTV+S  S L +A+DRN SSEEEV
Sbjct: 161 FMEAYCEMLTKYEQELSKPFKEAMLFLQRVECQFKALTVASPNSALGEASDRNGSSEEEV 220

Query: 244 DVNNSLIDPQAEDRELKGQLLRKYSGYLGNLKQEFMKKRKKGKLPKEARQQLLEWWSRHY 65
           DVNN+ IDPQAED+ELKGQLLR+YSGYLG+LKQEFMKKRKKGKLPKEARQQLL+WWSRHY
Sbjct: 221 DVNNNFIDPQAEDQELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 280

Query: 64  KWPYPSESQKVALAESTGLDQ 2
           KWPYPSESQK+ALAESTGLDQ
Sbjct: 281 KWPYPSESQKLALAESTGLDQ 301


>ref|XP_002317151.1| predicted protein [Populus trichocarpa] gi|222860216|gb|EEE97763.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  332 bits (852), Expect = 4e-89
 Identities = 171/235 (72%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
 Frame = -1

Query: 700 TATFTGCYLMXXXXXXXXXXXXXXXXXXXXXXXSVKAKIMSHPHYPRLLAAYVNCQKIGA 521
           T T TGCY M                        VKAKIM+HPHY RLLAAY NCQK+GA
Sbjct: 39  TVTATGCYFMDNNDGSSSS---------------VKAKIMAHPHYHRLLAAYANCQKVGA 83

Query: 520 PPEVVARLEEAYVSVAXXXXXXXXSIGEDPALDQFMEAYCEMLTKYEQELAKPFKEAMLF 341
           PPEVVARLEEA  S A         IGEDPALDQFMEAYCEMLTKYEQEL+KP KEAMLF
Sbjct: 84  PPEVVARLEEACASAASIAPANTGCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLF 143

Query: 340 LSKIESQFKALTVSS--SGLPDAADRNASSEEEVDVNNSLIDPQAEDRELKGQLLRKYSG 167
           L ++E QFKALT+SS  SG  D  DRN SSEEEVDVNN+ IDPQAED+ELKGQLLR+YSG
Sbjct: 144 LQRVECQFKALTLSSPISGCGDGNDRNVSSEEEVDVNNNFIDPQAEDQELKGQLLRRYSG 203

Query: 166 YLGNLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKVALAESTGLDQ 2
           YLG+LKQEFMKKRKKGKLPKEARQQLL+WWSRHYKWPYPSESQK+ALAESTGLDQ
Sbjct: 204 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQ 258


>gb|ABK93112.1| unknown [Populus trichocarpa]
          Length = 285

 Score =  332 bits (852), Expect = 4e-89
 Identities = 171/235 (72%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
 Frame = -1

Query: 700 TATFTGCYLMXXXXXXXXXXXXXXXXXXXXXXXSVKAKIMSHPHYPRLLAAYVNCQKIGA 521
           T T TGCY M                        VKAKIM+HPHY RLLAAY NCQK+GA
Sbjct: 14  TVTATGCYFMDNNDGSSSS---------------VKAKIMAHPHYHRLLAAYANCQKVGA 58

Query: 520 PPEVVARLEEAYVSVAXXXXXXXXSIGEDPALDQFMEAYCEMLTKYEQELAKPFKEAMLF 341
           PPEVVARLEEA  S A         IGEDPALDQFMEAYCEMLTKYEQEL+KP KEAMLF
Sbjct: 59  PPEVVARLEEACASAASIAPANTGCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLF 118

Query: 340 LSKIESQFKALTVSS--SGLPDAADRNASSEEEVDVNNSLIDPQAEDRELKGQLLRKYSG 167
           L ++E QFKALT+SS  SG  D  DRN SSEEEVDVNN+ IDPQAED+ELKGQLLR+YSG
Sbjct: 119 LQRVECQFKALTLSSPISGCGDGNDRNVSSEEEVDVNNNFIDPQAEDQELKGQLLRRYSG 178

Query: 166 YLGNLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKVALAESTGLDQ 2
           YLG+LKQEFMKKRKKGKLPKEARQQLL+WWSRHYKWPYPSESQK+ALAESTGLDQ
Sbjct: 179 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQ 233


>gb|AAV49801.1| homeobox transcription factor KN2 [Populus trichocarpa x Populus
           deltoides]
          Length = 373

 Score =  332 bits (852), Expect = 4e-89
 Identities = 171/235 (72%), Positives = 183/235 (77%), Gaps = 2/235 (0%)
 Frame = -1

Query: 700 TATFTGCYLMXXXXXXXXXXXXXXXXXXXXXXXSVKAKIMSHPHYPRLLAAYVNCQKIGA 521
           T T TGCY M                        VKAKIM+HPHY RLLAAY NCQK+GA
Sbjct: 102 TVTATGCYFMDNNDGSSSS---------------VKAKIMAHPHYHRLLAAYANCQKVGA 146

Query: 520 PPEVVARLEEAYVSVAXXXXXXXXSIGEDPALDQFMEAYCEMLTKYEQELAKPFKEAMLF 341
           PPEVVARLEEA  S A         IGEDPALDQFMEAYCEMLTKYEQEL+KP KEAMLF
Sbjct: 147 PPEVVARLEEACASAASIAPANTGCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLF 206

Query: 340 LSKIESQFKALTVSS--SGLPDAADRNASSEEEVDVNNSLIDPQAEDRELKGQLLRKYSG 167
           L ++E QFKALT+SS  SG  D  DRN SSEEEVDVNN+ IDPQAED+ELKGQLLR+YSG
Sbjct: 207 LQRVECQFKALTLSSPISGCGDGNDRNVSSEEEVDVNNNFIDPQAEDQELKGQLLRRYSG 266

Query: 166 YLGNLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSESQKVALAESTGLDQ 2
           YLG+LKQEFMKKRKKGKLPKEARQQLL+WWSRHYKWPYPSESQK+ALAESTGLDQ
Sbjct: 267 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALAESTGLDQ 321


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