BLASTX nr result

ID: Bupleurum21_contig00025371 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025371
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF36547.1| PII protein [Physcomitrella patens] gi|117580168...    82   4e-14
gb|ABK25872.1| unknown [Picea sitchensis]                              81   1e-13
gb|AAC78332.1| PII protein [Ricinus communis]                          80   2e-13
ref|XP_002515226.1| Nitrogen regulatory protein P-II, putative [...    80   2e-13
pdb|2O66|A Chain A, Crystal Structure Of Arabidopsis Thaliana Pi...    80   2e-13

>dbj|BAF36547.1| PII protein [Physcomitrella patens] gi|117580168|dbj|BAF36548.1|
           PII protein [Physcomitrella patens]
          Length = 232

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/55 (74%), Positives = 45/55 (81%)
 Frame = +3

Query: 3   VVSKDQVEEVTDTIISHARTGEIGDGKIFVMPVSDVIKVRTGKRGAKAVRNMTGR 167
           VVSKDQVE V DTII  ARTGEIGDGKIFV PVSD+I++RTG+RG KA R   GR
Sbjct: 165 VVSKDQVEAVIDTIIDQARTGEIGDGKIFVSPVSDIIRIRTGERGLKAERMAGGR 219


>gb|ABK25872.1| unknown [Picea sitchensis]
          Length = 175

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/55 (74%), Positives = 46/55 (83%)
 Frame = +3

Query: 3   VVSKDQVEEVTDTIISHARTGEIGDGKIFVMPVSDVIKVRTGKRGAKAVRNMTGR 167
           VVSKDQVE V DTII  ARTGEIGDGKIFV+PV+DVI+VRTG+RG +A R   GR
Sbjct: 113 VVSKDQVEAVIDTIIDEARTGEIGDGKIFVVPVADVIRVRTGERGLEAERMAGGR 167


>gb|AAC78332.1| PII protein [Ricinus communis]
          Length = 197

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = +3

Query: 3   VVSKDQVEEVTDTIISHARTGEIGDGKIFVMPVSDVIKVRTGKRGAKAVRNMTGRR 170
           VVSKDQVE+V + II  ARTGEIGDGKIF++PVSDVI+VRTG+RG KA R MTG R
Sbjct: 136 VVSKDQVEDVIEKIIEEARTGEIGDGKIFLLPVSDVIRVRTGERGDKAER-MTGGR 190


>ref|XP_002515226.1| Nitrogen regulatory protein P-II, putative [Ricinus communis]
           gi|223545706|gb|EEF47210.1| Nitrogen regulatory protein
           P-II, putative [Ricinus communis]
          Length = 110

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 42/56 (75%), Positives = 48/56 (85%)
 Frame = +3

Query: 3   VVSKDQVEEVTDTIISHARTGEIGDGKIFVMPVSDVIKVRTGKRGAKAVRNMTGRR 170
           VVSKDQVE+V + II  ARTGEIGDGKIF++PVSDVI+VRTG+RG KA R MTG R
Sbjct: 49  VVSKDQVEDVIEKIIEEARTGEIGDGKIFLLPVSDVIRVRTGERGDKAER-MTGGR 103


>pdb|2O66|A Chain A, Crystal Structure Of Arabidopsis Thaliana Pii Bound To
           Citrate gi|134105057|pdb|2O66|B Chain B, Crystal
           Structure Of Arabidopsis Thaliana Pii Bound To Citrate
           gi|134105058|pdb|2O66|C Chain C, Crystal Structure Of
           Arabidopsis Thaliana Pii Bound To Citrate
           gi|134105059|pdb|2O67|A Chain A, Crystal Structure Of
           Arabidopsis Thaliana Pii Bound To Malonate
           gi|134105060|pdb|2O67|B Chain B, Crystal Structure Of
           Arabidopsis Thaliana Pii Bound To Malonate
           gi|134105061|pdb|2O67|C Chain C, Crystal Structure Of
           Arabidopsis Thaliana Pii Bound To Malonate
           gi|158430791|pdb|2RD5|C Chain C, Structural Basis For
           The Regulation Of N-Acetylglutamate Kinase By Pii In
           Arabidopsis Thaliana gi|158430792|pdb|2RD5|D Chain D,
           Structural Basis For The Regulation Of N-Acetylglutamate
           Kinase By Pii In Arabidopsis Thaliana
          Length = 135

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/58 (74%), Positives = 47/58 (81%)
 Frame = +3

Query: 3   VVSKDQVEEVTDTIISHARTGEIGDGKIFVMPVSDVIKVRTGKRGAKAVRNMTGRRLS 176
           VV KDQVE V +TII  ARTGEIGDGKIFV+PVSDVI+VRTG+RG KA   MTG  LS
Sbjct: 77  VVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERGEKA-EKMTGDMLS 133


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