BLASTX nr result

ID: Bupleurum21_contig00025355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025355
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798...   150   1e-34
ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotei...   149   2e-34
ref|XP_002511089.1| nucleotide binding protein, putative [Ricinu...   148   4e-34
ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220...   147   7e-34
ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-contain...   145   4e-33

>ref|XP_003522451.1| PREDICTED: uncharacterized protein LOC100798141 [Glycine max]
          Length = 1494

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/103 (69%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   PTNDQLFVTSALDGFVNLWQLQAKGLSASCLSGTHCSPE--RKWPEDIAWHPHGNSIFSV 175
           P NDQLFVTSALDG VN WQ+QAKG  AS LS T C+ +  R+WPED+AWHP GNS+FSV
Sbjct: 225 PVNDQLFVTSALDGVVNFWQVQAKGAGASRLSTTDCASQKQRRWPEDLAWHPEGNSLFSV 284

Query: 176 FSADGGDSQVSVLDLNKGKERGRVSFLENKPHVKGNINNIMFM 304
           +SADGGDSQVS+ +LNKG+   RV FLE+KPHVKG IN I+FM
Sbjct: 285 YSADGGDSQVSITNLNKGQGGERVKFLEDKPHVKGIINGIVFM 327


>ref|XP_003526921.1| PREDICTED: U5 small nuclear ribonucleoprotein 40 kDa protein-like
           [Glycine max]
          Length = 533

 Score =  149 bits (377), Expect = 2e-34
 Identities = 72/103 (69%), Positives = 83/103 (80%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   PTNDQLFVTSALDGFVNLWQLQAKGLSASCLSGTHCSPE--RKWPEDIAWHPHGNSIFSV 175
           P NDQLFVTSALDG VN WQ+QAKG  AS LS T C+ +  R+WPED+AWHP GNS+FSV
Sbjct: 225 PVNDQLFVTSALDGVVNFWQVQAKGAGASRLSTTDCASQKQRRWPEDLAWHPEGNSLFSV 284

Query: 176 FSADGGDSQVSVLDLNKGKERGRVSFLENKPHVKGNINNIMFM 304
           +SADGGDSQVS+ +LNKG    RV FLE+KPHVKG IN I+FM
Sbjct: 285 YSADGGDSQVSITNLNKGPGGERVKFLEDKPHVKGIINGIVFM 327


>ref|XP_002511089.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223550204|gb|EEF51691.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 752

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/103 (67%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   PTNDQLFVTSALDGFVNLWQLQAKGLSASCLSGTHC-SP-ERKWPEDIAWHPHGNSIFSV 175
           P NDQLF TSALDG VNLWQ+Q++G SAS LSGT C SP +R+WPED+AWHP GNS+F  
Sbjct: 233 PVNDQLFATSALDGVVNLWQIQSRGSSASLLSGTDCLSPKDRRWPEDLAWHPLGNSLFCT 292

Query: 176 FSADGGDSQVSVLDLNKGKERGRVSFLENKPHVKGNINNIMFM 304
           +SADGGDSQ+S+L+LNK + R R+++LE+KPHVKG IN+I FM
Sbjct: 293 YSADGGDSQISILNLNKIQGRARITYLEDKPHVKGIINSISFM 335


>ref|XP_004145140.1| PREDICTED: uncharacterized protein LOC101220523 [Cucumis sativus]
           gi|449473874|ref|XP_004154008.1| PREDICTED:
           uncharacterized protein LOC101207060 [Cucumis sativus]
           gi|449523433|ref|XP_004168728.1| PREDICTED:
           uncharacterized LOC101207060 [Cucumis sativus]
          Length = 524

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/103 (67%), Positives = 87/103 (84%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   PTNDQLFVTSALDGFVNLWQLQAKGLSASCLSGTHC-SP-ERKWPEDIAWHPHGNSIFSV 175
           P N+QLFVTSALDG VNLWQLQA+G SAS LS   C SP +R+WPED+AWHP GN +F V
Sbjct: 216 PVNEQLFVTSALDGVVNLWQLQARGSSASLLSSADCVSPKQRRWPEDMAWHPEGNRVFLV 275

Query: 176 FSADGGDSQVSVLDLNKGKERGRVSFLENKPHVKGNINNIMFM 304
           +SADGGDSQVS+++LNK + + RV+FLE+KPHVKG IN+I+F+
Sbjct: 276 YSADGGDSQVSIMNLNKSEGKARVTFLEDKPHVKGIINSIIFL 318


>ref|XP_002280902.1| PREDICTED: uncharacterized WD repeat-containing protein alr3466
           [Vitis vinifera] gi|297734510|emb|CBI15757.3| unnamed
           protein product [Vitis vinifera]
          Length = 526

 Score =  145 bits (365), Expect = 4e-33
 Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
 Frame = +2

Query: 2   PTNDQLFVTSALDGFVNLWQLQAKGLSASCLSGTHC--SPERKWPEDIAWHPHGNSIFSV 175
           P N+QLF TSALDG VNLWQ+QA+G  AS LS T C    +R+WPED+AWHP GNSIFSV
Sbjct: 218 PVNNQLFATSALDGIVNLWQIQARGSGASLLSATDCLSQKQRRWPEDMAWHPEGNSIFSV 277

Query: 176 FSADGGDSQVSVLDLNKGKERGRVSFLENKPHVKGNINNIMFM 304
           ++AD GDSQ+SVL+LN+ K   RV+FLE KPHVKG IN+I FM
Sbjct: 278 YNADDGDSQISVLNLNRTKGGARVTFLEEKPHVKGIINSISFM 320


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