BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025350
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            72   6e-11
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    72   6e-11
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    67   1e-09
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...    67   2e-09

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 38/91 (41%), Positives = 58/91 (63%)
 Frame = -2

Query: 296 KVAWNDCSKPKCCGGLGIKNIRAWNKAAIQFQLWRIISDKHDSLWLQWFRSSFLKNKSFW 117
           KVAW+    PK  GGLGIK+I+ WNK A+   +W + +D   S+W  W RS+ L+ ++FW
Sbjct: 146 KVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFW 205

Query: 116 TMKSPRSCPWSIRKILGCRGESIDHLSYQMG 24
           T+K+P++C W+  KIL  R  +   + Y +G
Sbjct: 206 TIKTPQNCSWAWGKILKLRSLAWPKMKYIIG 236


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/86 (37%), Positives = 50/86 (58%)
 Frame = -2

Query: 317 LDGNCTHKVAWNDCSKPKCCGGLGIKNIRAWNKAAIQFQLWRIISDKHDSLWLQWFRSSF 138
           +DG  + KV+W DC  PK  GGLG ++   WNK  +   +W ++ D+  SLW QW R   
Sbjct: 705 IDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHR 763

Query: 137 LKNKSFWTMKSPRSCPWSIRKILGCR 60
           L + SFW + + ++ PW+ + +L  R
Sbjct: 764 LGHASFWQVNALQTDPWTWKMLLNLR 789


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/86 (37%), Positives = 50/86 (58%)
 Frame = -2

Query: 317 LDGNCTHKVAWNDCSKPKCCGGLGIKNIRAWNKAAIQFQLWRIISDKHDSLWLQWFRSSF 138
           +DG  + KV+W DC  PK  GGLG ++   WNK  +   +W ++ D+  SLW QW R   
Sbjct: 705 IDGRKSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIW-VLFDRDTSLWAQWQRHHR 763

Query: 137 LKNKSFWTMKSPRSCPWSIRKILGCR 60
           L + SFW + + ++ PW+ + +L  R
Sbjct: 764 LGHASFWQVNALQTDPWTWKMLLNLR 789


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/79 (39%), Positives = 47/79 (59%)
 Frame = -2

Query: 296 KVAWNDCSKPKCCGGLGIKNIRAWNKAAIQFQLWRIISDKHDSLWLQWFRSSFLKNKSFW 117
           K+AW    +PK  GGLG+++I+  N       +WRI+S + DSLW+QW R+  LK  +FW
Sbjct: 377 KIAWETVCRPKREGGLGLQSIKEANDVCCLKLIWRIVS-QGDSLWVQWIRTYLLKRNTFW 435

Query: 116 TMKSPRSCPWSIRKILGCR 60
           + +S     W  +K+L  R
Sbjct: 436 SFRSASQGSWMWKKLLKYR 454


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -2

Query: 296 KVAWNDCSKPKCCGGLGIKNIRAWNKAAIQFQLWRIISDKHDSLWLQWFRSSFLKNKSFW 117
           K+AW D  KPK  GGLG+++++  N  +    +WRIIS   DSLW++W  ++ LK  SFW
Sbjct: 241 KIAWTDVCKPKDEGGLGLRSLKEANDVSCLKLIWRIISHA-DSLWVKWIHATLLKQVSFW 299

Query: 116 TMKSPRSC-PWSIRKILGCRGESI 48
            ++   S   W  +K+L  R  +I
Sbjct: 300 AVRENTSLGSWMWKKVLKFRDAAI 323