BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025338
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi...   194   5e-48
emb|CBI32673.3| unnamed protein product [Vitis vinifera]              194   5e-48
emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]   194   8e-48
ref|XP_002533004.1| pentatricopeptide repeat-containing protein,...   176   2e-42
ref|NP_199060.3| pentatricopeptide repeat-containing protein [Ar...   173   1e-41

>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
           mitochondrial-like [Vitis vinifera]
          Length = 538

 Score =  194 bits (494), Expect = 5e-48
 Identities = 94/130 (72%), Positives = 111/130 (85%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           +FGTVIPSST L+DLN GRQ HA   K GL SN+FVGS+++  YAKL++I EA++  EDT
Sbjct: 113 SFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDT 172

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMPERNGVSWNAMISGYSQMGHNEEAVNLFI 31
            +PNVVSYTTL+RGYL+K RFDDAL++FR MPERN VSWNAMISGYSQMG+NEEAVNLF+
Sbjct: 173 HEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFV 232

Query: 30  EMLREGFLPN 1
            MLREG LPN
Sbjct: 233 VMLREGTLPN 242


>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  194 bits (494), Expect = 5e-48
 Identities = 94/130 (72%), Positives = 111/130 (85%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           +FGTVIPSST L+DLN GRQ HA   K GL SN+FVGS+++  YAKL++I EA++  EDT
Sbjct: 394 SFGTVIPSSTALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDT 453

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMPERNGVSWNAMISGYSQMGHNEEAVNLFI 31
            +PNVVSYTTL+RGYL+K RFDDAL++FR MPERN VSWNAMISGYSQMG+NEEAVNLF+
Sbjct: 454 HEPNVVSYTTLIRGYLKKERFDDALALFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFV 513

Query: 30  EMLREGFLPN 1
            MLREG LPN
Sbjct: 514 VMLREGTLPN 523


>emb|CAN83542.1| hypothetical protein VITISV_021357 [Vitis vinifera]
          Length = 795

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/130 (71%), Positives = 111/130 (85%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           +FGTVIPS+T L+DLN GRQ HA   K GL SN+FVGS+++  YAKL++I EA++  EDT
Sbjct: 370 SFGTVIPSATALQDLNSGRQLHACAIKMGLESNVFVGSAVVDFYAKLTSINEAQKAFEDT 429

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMPERNGVSWNAMISGYSQMGHNEEAVNLFI 31
            +PNVVSYTTL+RGYL+K RFDDAL++FR MPERN VSWNAMISGYSQMG+NEEAVNLF+
Sbjct: 430 HEPNVVSYTTLIRGYLKKERFDDALALFRXMPERNVVSWNAMISGYSQMGYNEEAVNLFV 489

Query: 30  EMLREGFLPN 1
            MLREG LPN
Sbjct: 490 VMLREGXLPN 499


>ref|XP_002533004.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527215|gb|EEF29379.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/130 (66%), Positives = 103/130 (79%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           TF TVI SST LK++ LG+Q HA   K GL + +FVGS+ML  YAKL + EEAR   ED 
Sbjct: 101 TFATVIHSSTGLKNIYLGKQLHARTMKMGLNTIVFVGSAMLDFYAKLCSFEEARNAFEDI 160

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMPERNGVSWNAMISGYSQMGHNEEAVNLFI 31
           + PNVVSYTTL+ GYL+K + DDAL +F+ MPERN VSWNAM+ G+SQMGHNEEAV+LFI
Sbjct: 161 QKPNVVSYTTLIHGYLKKGKIDDALQLFQEMPERNVVSWNAMVGGFSQMGHNEEAVSLFI 220

Query: 30  EMLREGFLPN 1
           EMLREGF+PN
Sbjct: 221 EMLREGFMPN 230



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 4/129 (3%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           TF   I S+  +  L +G+ FHA   K+   S++FV +S++S YAK  ++E++  V  + 
Sbjct: 233 TFPCAITSAANMASLGMGKSFHACAVKSLCTSDVFVCNSLVSFYAKCGSMEDSLLVFNEL 292

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMP----ERNGVSWNAMISGYSQMGHNEEAV 43
            D N VS+  ++ G+ +  R +DA+  F  M       N V+   ++   +  G  E+  
Sbjct: 293 PDRNTVSWNAVICGFAQNGRGEDAVIFFERMRAAGLRPNSVTLLGLLCACNHAGLVEKGY 352

Query: 42  NLFIEMLRE 16
             F +M +E
Sbjct: 353 MYFNQMRQE 361


>ref|NP_199060.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170829|sp|Q9FIH2.1|PP414_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g42450, mitochondrial; Flags: Precursor
           gi|9759481|dbj|BAB10486.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007429|gb|AED94812.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 517

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/131 (64%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
 Frame = -1

Query: 390 TFGTVIPSSTTLKDLNLGRQFHAYVSKAGLASNLFVGSSMLSLYAKLSTIEEARRVLEDT 211
           TFGTVI SSTT +D+ LG+Q H Y  K GLASN+FVGS++L+ Y KLST+ +ARR  +DT
Sbjct: 95  TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT 154

Query: 210 RDPNVVSYTTLMRGYLEKRRFDDALSIFRAMPERNGVSWNAMISGYSQMGHNEEAVNLFI 31
           RDPNVVS T L+ GYL+K  F++ALS+FRAMPER+ V+WNA+I G+SQ G NEEAVN F+
Sbjct: 155 RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFV 214

Query: 30  EMLREG-FLPN 1
           +MLREG  +PN
Sbjct: 215 DMLREGVVIPN 225