BLASTX nr result

ID: Bupleurum21_contig00025325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025325
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         138   5e-36
emb|CBI30649.3| unnamed protein product [Vitis vinifera]              120   2e-30
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   120   2e-30
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   119   5e-30
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   118   3e-29

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  138 bits (348), Expect(2) = 5e-36
 Identities = 62/98 (63%), Positives = 75/98 (76%), Gaps = 1/98 (1%)
 Frame = +3

Query: 63  MLTVERLEPKIKDIEWLRKTNATVGCDG-GFVINYLKDVLRLENIKTIHRQSDYPSEFDK 239
           MLTV RLEP +KDI W+++TNATVGCDG  FV +YL+ VL L+NIK I  Q DYP E + 
Sbjct: 653 MLTVPRLEPSVKDIGWIKRTNATVGCDGDSFVKDYLRQVLELQNIKNISNQDDYPKELEN 712

Query: 240 GSISAAFLELPYQKVFLEEYCNQYTTVGPTYKFGGFGF 353
           G+I AAFLE+PYQK+FL E+CNQY   GP Y+FGG  F
Sbjct: 713 GNIKAAFLEIPYQKIFLREHCNQYVVAGPNYRFGGLAF 750



 Score = 37.7 bits (86), Expect(2) = 5e-36
 Identities = 16/23 (69%), Positives = 21/23 (91%)
 Frame = +1

Query: 430 AFQKGSPIGRDVSEAILIISENG 498
           AFQKGSP+ RDVSEAIL ++++G
Sbjct: 751 AFQKGSPLARDVSEAILTLTQDG 773


>emb|CBI30649.3| unnamed protein product [Vitis vinifera]
          Length = 924

 Score =  120 bits (302), Expect(2) = 2e-30
 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = +3

Query: 63  MLTVERLEPKIKDIEWLRKTNATVGCDG-GFVINYLKDVL--RLENIKTIHRQSDYPSEF 233
           MLTV+RLEP + DIEWL+     VGCDG  FV  YL+DVL  + +NIK I  Q  YP+EF
Sbjct: 674 MLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISSQYAYPNEF 733

Query: 234 DKGSISAAFLELPYQKVFLEEYCNQYTTVGPTYKFGGFGFV 356
            KG+ISAAFLELPY+KVF+  YC +YT   P  +FGG GFV
Sbjct: 734 QKGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFV 774



 Score = 36.2 bits (82), Expect(2) = 2e-30
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +1

Query: 433 FQKGSPIGRDVSEAILIISENGV 501
           FQKGSPI  DVS+AIL +SE G+
Sbjct: 775 FQKGSPIAADVSKAILTLSERGI 797


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  120 bits (302), Expect(2) = 2e-30
 Identities = 60/101 (59%), Positives = 72/101 (71%), Gaps = 3/101 (2%)
 Frame = +3

Query: 63  MLTVERLEPKIKDIEWLRKTNATVGCDG-GFVINYLKDVL--RLENIKTIHRQSDYPSEF 233
           MLTV+RLEP + DIEWL+     VGCDG  FV  YL+DVL  + +NIK I  Q  YP+EF
Sbjct: 666 MLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLEDVLDFKKDNIKNISSQYAYPNEF 725

Query: 234 DKGSISAAFLELPYQKVFLEEYCNQYTTVGPTYKFGGFGFV 356
            KG+ISAAFLELPY+KVF+  YC +YT   P  +FGG GFV
Sbjct: 726 QKGTISAAFLELPYEKVFMNRYCKKYTASNPLSRFGGLGFV 766



 Score = 36.2 bits (82), Expect(2) = 2e-30
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +1

Query: 433 FQKGSPIGRDVSEAILIISENGV 501
           FQKGSPI  DVS+AIL +SE G+
Sbjct: 767 FQKGSPIAADVSKAILTLSERGI 789


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  119 bits (299), Expect(2) = 5e-30
 Identities = 60/101 (59%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
 Frame = +3

Query: 63  MLTVERLEPKIKDIEWLRKTNATVGCDG-GFVINYLKDVL--RLENIKTIHRQSDYPSEF 233
           MLTV+RLEP + DIEWL+     VGCDG  FV  YL DVL  + +NIK I  Q  YP+EF
Sbjct: 666 MLTVQRLEPNVTDIEWLKVHKLNVGCDGDSFVRKYLXDVLDFKKDNIKNISSQYXYPNEF 725

Query: 234 DKGSISAAFLELPYQKVFLEEYCNQYTTVGPTYKFGGFGFV 356
            KG+ISAAFLELPY+KVF+  YC  YT   P  +FGG GFV
Sbjct: 726 QKGTISAAFLELPYEKVFMNRYCKXYTASNPLSRFGGLGFV 766



 Score = 36.2 bits (82), Expect(2) = 5e-30
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +1

Query: 433 FQKGSPIGRDVSEAILIISENGV 501
           FQKGSPI  DVS+AIL +SE G+
Sbjct: 767 FQKGSPIAADVSKAILTLSERGI 789


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score =  118 bits (296), Expect(2) = 3e-29
 Identities = 56/101 (55%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
 Frame = +3

Query: 63  MLTVERLEPKIKDIEWLRKTNATVGCDG-GFVINYLKDVL--RLENIKTIHRQSDYPSEF 233
           MLTV RL+P + DIEWL++ +  VGCDG  FV NYL++VL  + ENIK +  +  Y  EF
Sbjct: 655 MLTVRRLQPNVTDIEWLKRNSLKVGCDGDSFVRNYLQNVLGFKQENIKNVSSEYSYEGEF 714

Query: 234 DKGSISAAFLELPYQKVFLEEYCNQYTTVGPTYKFGGFGFV 356
           +  +ISAAFLELPY+KVF+  YC +Y+   PTY+FGG GFV
Sbjct: 715 ESATISAAFLELPYEKVFIGHYCKRYSATTPTYRFGGLGFV 755



 Score = 34.7 bits (78), Expect(2) = 3e-29
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +1

Query: 433 FQKGSPIGRDVSEAILIISENG 498
           FQKGSPI  DVS+AIL +SE+G
Sbjct: 756 FQKGSPIAADVSKAILNLSEDG 777


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