BLASTX nr result

ID: Bupleurum21_contig00025311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025311
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264377.2| PREDICTED: LOW QUALITY PROTEIN: translation ...    59   5e-07
ref|XP_002879527.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containi...    59   5e-07
emb|CBI38103.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|NP_181042.1| translation initiation factor eIF-2B epsilon su...    58   9e-07
ref|XP_002870056.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containi...    55   6e-06

>ref|XP_002264377.2| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
           eIF-2B subunit epsilon-like [Vitis vinifera]
          Length = 458

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   ILHFLYNKDIIQEEAILKWXXXXXXXXXXXXVFVKQCETFIRWLNEA 143
           ILH LY KDI+QE+AILKW            VFVKQ E FI+WLNEA
Sbjct: 407 ILHILYEKDILQEDAILKWASEKEGAEESDRVFVKQSEKFIQWLNEA 453


>ref|XP_002879527.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297325366|gb|EFH55786.1|
           eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 726

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +3

Query: 3   ILHFLYNKDIIQEEAILKWXXXXXXXXXXXXVFVKQCETFIRWLNEA 143
           ILH LY+KD++QE+A+L+W            V++KQCETFI+WL EA
Sbjct: 666 ILHLLYDKDVLQEDAVLRWAEEKAGADEADKVYLKQCETFIQWLKEA 712


>emb|CBI38103.3| unnamed protein product [Vitis vinifera]
          Length = 730

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/47 (59%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   ILHFLYNKDIIQEEAILKWXXXXXXXXXXXXVFVKQCETFIRWLNEA 143
           ILH LY KDI+QE+AILKW            VFVKQ E FI+WLNEA
Sbjct: 679 ILHILYEKDILQEDAILKWASEKEGAEESDRVFVKQSEKFIQWLNEA 725


>ref|NP_181042.1| translation initiation factor eIF-2B epsilon subunit [Arabidopsis
           thaliana] gi|3033392|gb|AAC12836.1| putative translation
           initiation factor eIF-2B epsilon subunit [Arabidopsis
           thaliana] gi|22655208|gb|AAM98194.1| putative
           translation initiation factor eIF-2B epsilon subunit
           [Arabidopsis thaliana] gi|34098787|gb|AAQ56776.1|
           At2g34970 [Arabidopsis thaliana]
           gi|330253950|gb|AEC09044.1| translation initiation
           factor eIF-2B epsilon subunit [Arabidopsis thaliana]
          Length = 730

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +3

Query: 3   ILHFLYNKDIIQEEAILKWXXXXXXXXXXXXVFVKQCETFIRWLNEA 143
           ILH LY+KD++QE+AIL+W            V++KQC+TFI+WL EA
Sbjct: 667 ILHLLYDKDVLQEDAILRWEEEKAGADEADKVYLKQCDTFIQWLKEA 713


>ref|XP_002870056.1| eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297315892|gb|EFH46315.1|
           eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 711

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = +3

Query: 3   ILHFLYNKDIIQEEAILKWXXXXXXXXXXXXVFVKQCETFIRWLNEA 143
           I+HFLY+KD++QE AIL+W            V++ QCE FI+WL EA
Sbjct: 655 IVHFLYDKDVVQEGAILRWGEEKAGADECDKVYLNQCEAFIQWLKEA 701


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