BLASTX nr result

ID: Bupleurum21_contig00025288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025288
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   204   5e-51
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   199   1e-49
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   198   4e-49
emb|CAB75932.1| putative protein [Arabidopsis thaliana]               197   7e-49
emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]   195   3e-48

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  204 bits (520), Expect = 5e-51
 Identities = 99/146 (67%), Positives = 122/146 (83%)
 Frame = +2

Query: 2    FNLHEGNAVKNPIVPGSRLSKERGEAKVDVTMYKRLIGSLMYITATRPDLMYVVCFLSRF 181
            F + + N+VKNPIVPG RL K+   +KV+ TMYK+L+GSLM++TATRPDLMYVV  +SRF
Sbjct: 786  FRMEKSNSVKNPIVPGVRLMKDEEGSKVNATMYKQLVGSLMHLTATRPDLMYVVSLISRF 845

Query: 182  MGEPTEQHMQAAKRVLRYLKGTTNFGVMYKKSNFDDFTLVAYTDSDYAGDLDDRRSTSGY 361
            M  PTE H+QAAKRVLRYLKGT + G++Y+K    +  L+AYTDSDYAGD+DDR+STSGY
Sbjct: 846  MASPTELHLQAAKRVLRYLKGTVDLGILYQKEGNGE--LIAYTDSDYAGDVDDRKSTSGY 903

Query: 362  VFLLNGGAVSWASKKQPVVSLSTTEA 439
            VFLL+ G VSW+SKKQPVV+LSTTEA
Sbjct: 904  VFLLSEGVVSWSSKKQPVVTLSTTEA 929


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  199 bits (507), Expect = 1e-49
 Identities = 97/146 (66%), Positives = 120/146 (82%)
 Frame = +2

Query: 2    FNLHEGNAVKNPIVPGSRLSKERGEAKVDVTMYKRLIGSLMYITATRPDLMYVVCFLSRF 181
            F + + N V+NPIVPGS+LS E G A VD T++K+L+GSLMY+TATRPDL+YVVC +SRF
Sbjct: 933  FGMGKSNPVRNPIVPGSKLSMEAGGAVVDGTLFKQLVGSLMYLTATRPDLIYVVCLISRF 992

Query: 182  MGEPTEQHMQAAKRVLRYLKGTTNFGVMYKKSNFDDFTLVAYTDSDYAGDLDDRRSTSGY 361
            M  P E H+ AAKRVLRYLKGTT  GV Y++   D+  LV YTDSDYAGD+D +RSTSG+
Sbjct: 993  MAHPREAHLSAAKRVLRYLKGTTELGVFYRRGVDDE--LVGYTDSDYAGDMDGKRSTSGF 1050

Query: 362  VFLLNGGAVSWASKKQPVVSLSTTEA 439
            VF+L+GGAVSW+S+KQ VV+LSTTEA
Sbjct: 1051 VFMLSGGAVSWSSRKQHVVTLSTTEA 1076


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/146 (63%), Positives = 120/146 (82%)
 Frame = +2

Query: 2    FNLHEGNAVKNPIVPGSRLSKERGEAKVDVTMYKRLIGSLMYITATRPDLMYVVCFLSRF 181
            F + + N+V NPIVPG +L K+ G  KVD T YK+++GSLMY+ ATRPD+M+VV  +SR+
Sbjct: 1039 FGMDKSNSVHNPIVPGFKLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMFVVSLISRY 1098

Query: 182  MGEPTEQHMQAAKRVLRYLKGTTNFGVMYKKSNFDDFTLVAYTDSDYAGDLDDRRSTSGY 361
            M  PTE H+QAAKRVLRYL+GTT FG+ Y+K   D+  LV YT+SD+AGDLD+R+STSGY
Sbjct: 1099 MENPTELHLQAAKRVLRYLQGTTEFGIFYRKGGDDE--LVTYTBSDHAGDLDERKSTSGY 1156

Query: 362  VFLLNGGAVSWASKKQPVVSLSTTEA 439
            VFLL+ GA+SW+SKKQP+VSLS+TEA
Sbjct: 1157 VFLLSSGAISWSSKKQPIVSLSSTEA 1182


>emb|CAB75932.1| putative protein [Arabidopsis thaliana]
          Length = 1339

 Score =  197 bits (501), Expect = 7e-49
 Identities = 93/146 (63%), Positives = 114/146 (78%)
 Frame = +2

Query: 2    FNLHEGNAVKNPIVPGSRLSKERGEAKVDVTMYKRLIGSLMYITATRPDLMYVVCFLSRF 181
            F + E NAVKNPIVPG++L+K+    KVD TM+K+L+GSLMY+T TRPDLMY VC +SRF
Sbjct: 1083 FGMDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRF 1142

Query: 182  MGEPTEQHMQAAKRVLRYLKGTTNFGVMYKKSNFDDFTLVAYTDSDYAGDLDDRRSTSGY 361
            M  P   H  AAKR+LRYLKGT   G+ Y++       L+A+TDSDYAGDL+DRRSTSG+
Sbjct: 1143 MSNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGF 1202

Query: 362  VFLLNGGAVSWASKKQPVVSLSTTEA 439
            VFL+  GA+ WASKKQPVV+LSTTEA
Sbjct: 1203 VFLMASGAICWASKKQPVVALSTTEA 1228


>emb|CAN83995.1| hypothetical protein VITISV_031192 [Vitis vinifera]
          Length = 288

 Score =  195 bits (496), Expect = 3e-48
 Identities = 98/146 (67%), Positives = 115/146 (78%)
 Frame = +2

Query: 2   FNLHEGNAVKNPIVPGSRLSKERGEAKVDVTMYKRLIGSLMYITATRPDLMYVVCFLSRF 181
           F L   N++KNPIVP  +L KE    ++D T+YK+LIGSLMYITATRPDLMYVVC LSR+
Sbjct: 52  FGLQNANSMKNPIVPDFKLLKEGETTRIDATIYKQLIGSLMYITATRPDLMYVVCLLSRY 111

Query: 182 MGEPTEQHMQAAKRVLRYLKGTTNFGVMYKKSNFDDFTLVAYTDSDYAGDLDDRRSTSGY 361
           M  PT+ HMQA KRVL YLKGT   GV YK+   D   L+AYTD +YAGD +DR++TSGY
Sbjct: 112 MANPTDLHMQATKRVLHYLKGTVELGVFYKRGE-DVGELLAYTDINYAGDTNDRKNTSGY 170

Query: 362 VFLLNGGAVSWASKKQPVVSLSTTEA 439
           VFLL+GGAVSWASKKQ VV+LSTTEA
Sbjct: 171 VFLLSGGAVSWASKKQLVVTLSTTEA 196


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