BLASTX nr result

ID: Bupleurum21_contig00025256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025256
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250...   117   2e-24
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   116   4e-24
emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]   113   3e-23
ref|XP_003557047.1| PREDICTED: uncharacterized protein LOC100784...   109   5e-22
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   109   6e-22

>ref|XP_002273299.2| PREDICTED: uncharacterized protein LOC100250138 [Vitis vinifera]
          Length = 1406

 Score =  117 bits (293), Expect = 2e-24
 Identities = 61/136 (44%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
 Frame = +1

Query: 301 PPAVPKYLKATAESNGVHDILIHHDQLLSNLKHNLAQAQNRMKSYADQRRTEKERNVEDW 480
           PP +P Y + +     + + L+  D LL  LK NL QAQ+RM   ++  R + +  V D 
Sbjct: 504 PPIIPAYTQGSTSIQALDEALVERDALLRTLKENLRQAQHRMTQKSNAHRRDLQLEVGDM 563

Query: 481 ALVKLQPYRQTTVARRPNEKLARRFYGPLPFHIIGRIEPVAYRLRWPPDAKIHNVFHISL 660
            LV+LQPYRQTT A RP +KLA+R+YG  P+ ++ RI  VAYRL  P   KIH +FHIS 
Sbjct: 564 VLVRLQPYRQTTAAHRPYQKLAKRYYG--PYQVLERIGAVAYRLALPSGCKIHPMFHISA 621

Query: 661 FKGFLSD-PSDTDPTP 705
           FK F    P +  P P
Sbjct: 622 FKPFRGPVPEEVYPLP 637


>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  116 bits (291), Expect = 4e-24
 Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 2/159 (1%)
 Frame = +1

Query: 235  EIESNTPLTDSPKTSSLPGFST--PPAVPKYLKATAESNGVHDILIHHDQLLSNLKHNLA 408
            E   NT +  S K +         PP +  Y+  T+    V + L   D +L  L++NL 
Sbjct: 1190 EFSYNTSIHSSTKMTXFEAVYXILPPRLLAYVPGTSXVQAVDEYLRDRDAILRELRYNLL 1249

Query: 409  QAQNRMKSYADQRRTEKERNVEDWALVKLQPYRQTTVARRPNEKLARRFYGPLPFHIIGR 588
            QAQNRMK  ADQ R +    V D+  +KLQPYRQT+VA R + KLA RF+G  P+ +I +
Sbjct: 1250 QAQNRMKCQADQHRRDASFAVGDYVYLKLQPYRQTSVAFRGSMKLAPRFFG--PYQVIEK 1307

Query: 589  IEPVAYRLRWPPDAKIHNVFHISLFKGFLSDPSDTDPTP 705
            +  VAY+L  PP ++IHNVFH+SL +  L   + T P P
Sbjct: 1308 VGSVAYKLALPPGSQIHNVFHVSLLRRHLGSITPTLPIP 1346


>emb|CAN73669.1| hypothetical protein VITISV_003711 [Vitis vinifera]
          Length = 1308

 Score =  113 bits (283), Expect = 3e-23
 Identities = 59/131 (45%), Positives = 84/131 (64%)
 Frame = +1

Query: 301  PPAVPKYLKATAESNGVHDILIHHDQLLSNLKHNLAQAQNRMKSYADQRRTEKERNVEDW 480
            PP +P YL+  +  + V  +L+H D+LL  LK NL  + NRMK  AD +R + +  V D 
Sbjct: 1086 PPLIPAYLEGLSLVHEVDQMLLHRDKLLHQLKTNLEISMNRMKQQADSKRRDIQFAVGDQ 1145

Query: 481  ALVKLQPYRQTTVARRPNEKLARRFYGPLPFHIIGRIEPVAYRLRWPPDAKIHNVFHISL 660
             L+KL+PYRQ  V +R ++KL+  +YGP P  I+ +I  VAYRL+ PP A+IH VFH+SL
Sbjct: 1146 VLLKLRPYRQQIVFKRGHKKLSNCYYGPYP--ILEKIGAVAYRLQLPPTARIHPVFHVSL 1203

Query: 661  FKGFLSDPSDT 693
             K +   P+ T
Sbjct: 1204 LKSYNGTPAVT 1214


>ref|XP_003557047.1| PREDICTED: uncharacterized protein LOC100784241 [Glycine max]
          Length = 1523

 Score =  109 bits (273), Expect = 5e-22
 Identities = 67/182 (36%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
 Frame = +1

Query: 172  IQKALGELIHQVNQLQKKSSDEIESNTPLTDSPKTSSLPGFST----PPAVPKYLKATAE 339
            +++ L   +H+  Q   K    +E +   + +  T S P   T    P   P+YL  T  
Sbjct: 897  VEQYLRAFVHRRPQRWGKLLPWVEWSHNTSWTAGTGSTPYEVTFGRKPFNFPEYLSGTTN 956

Query: 340  SNGVHDILIHHDQLLSNLKHNLAQAQNRMKSYADQRRTEKERNVEDWALVKLQPYRQTTV 519
               V D+L   D    +++  L +AQ +MK  ADQ+R E    V DW L++L+PYRQ++ 
Sbjct: 957  IEAVEDLLTDRDTTFQDIRKKLLKAQAQMKQQADQKRREVHYQVGDWVLLRLRPYRQSST 1016

Query: 520  ARRPN--EKLARRFYGPLPFHIIGRIEPVAYRLRWPPDAKIHNVFHISLFKGFLSDPSDT 693
                +   KLA+RFYG  PF +I RI PVAY+L+ P +AKIH VFH S  K F   P+  
Sbjct: 1017 KGNSSVCAKLAKRFYG--PFQVIERIGPVAYKLKLPDEAKIHPVFHCSKLKPFRGPPTSP 1074

Query: 694  DP 699
             P
Sbjct: 1075 SP 1076


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  109 bits (272), Expect = 6e-22
 Identities = 58/122 (47%), Positives = 77/122 (63%)
 Frame = +1

Query: 301  PPAVPKYLKATAESNGVHDILIHHDQLLSNLKHNLAQAQNRMKSYADQRRTEKERNVEDW 480
            PP V +  K       +  +L   D ++ +L+ NL +AQ RMK YAD  RTE E  V D 
Sbjct: 1397 PPHVVRAPKGQTSVESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDA 1456

Query: 481  ALVKLQPYRQTTVARRPNEKLARRFYGPLPFHIIGRIEPVAYRLRWPPDAKIHNVFHISL 660
              ++LQPYRQ ++A+RP EKLA RFYG  PF ++ RI   AY+L+ PP +KIH VFH+SL
Sbjct: 1457 VFLRLQPYRQRSLAKRPFEKLAPRFYG--PFTVLQRIGATAYKLQLPPSSKIHPVFHVSL 1514

Query: 661  FK 666
             K
Sbjct: 1515 LK 1516


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