BLASTX nr result

ID: Bupleurum21_contig00025248 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025248
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26137.3| unnamed protein product [Vitis vinifera]               99   4e-19
ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like pr...    99   4e-19
ref|XP_002516839.1| Squamosa promoter-binding protein, putative ...    87   2e-15
ref|XP_002311811.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003547221.1| PREDICTED: squamosa promoter-binding-like pr...    74   1e-11

>emb|CBI26137.3| unnamed protein product [Vitis vinifera]
          Length = 692

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 282 ASKYLDNSETAPLLNAEVIMSVNHSKEQQRMPSSLLLTNTFLPSRPLIFLISAVAVCFGI 103
           +S   D SET  LLN EV+M++N  KEQ R   SL+ +   + SRP +++I A A CFGI
Sbjct: 608 SSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAMTSRPFLYMIVAAAACFGI 667

Query: 102 CAIVFHPHKVGEIAVTIRRCLFDHS 28
           CA++ HPH+VG++AV+IRRCLFD+S
Sbjct: 668 CAVLLHPHEVGKLAVSIRRCLFDNS 692


>ref|XP_002277039.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Vitis
           vinifera]
          Length = 801

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/85 (52%), Positives = 62/85 (72%)
 Frame = -3

Query: 282 ASKYLDNSETAPLLNAEVIMSVNHSKEQQRMPSSLLLTNTFLPSRPLIFLISAVAVCFGI 103
           +S   D SET  LLN EV+M++N  KEQ R   SL+ +   + SRP +++I A A CFGI
Sbjct: 717 SSTSTDRSETVSLLNREVVMNMNSIKEQPRKSCSLIFSKKAMTSRPFLYMIVAAAACFGI 776

Query: 102 CAIVFHPHKVGEIAVTIRRCLFDHS 28
           CA++ HPH+VG++AV+IRRCLFD+S
Sbjct: 777 CAVLLHPHEVGKLAVSIRRCLFDNS 801


>ref|XP_002516839.1| Squamosa promoter-binding protein, putative [Ricinus communis]
           gi|223543927|gb|EEF45453.1| Squamosa promoter-binding
           protein, putative [Ricinus communis]
          Length = 795

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/76 (51%), Positives = 54/76 (71%)
 Frame = -3

Query: 261 SETAPLLNAEVIMSVNHSKEQQRMPSSLLLTNTFLPSRPLIFLISAVAVCFGICAIVFHP 82
           S+  PLLN EV+M+VN  K++     SL+ +   L SRP +FLI+ VAVCFG+CAI+ HP
Sbjct: 718 SDKVPLLNKEVVMNVNLVKDRPNQSCSLIFSKRVLRSRPTVFLIATVAVCFGVCAIILHP 777

Query: 81  HKVGEIAVTIRRCLFD 34
           ++V   AV++RRCL D
Sbjct: 778 NQVSRFAVSVRRCLTD 793


>ref|XP_002311811.1| predicted protein [Populus trichocarpa] gi|222851631|gb|EEE89178.1|
           predicted protein [Populus trichocarpa]
          Length = 793

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 53/80 (66%)
 Frame = -3

Query: 279 SKYLDNSETAPLLNAEVIMSVNHSKEQQRMPSSLLLTNTFLPSRPLIFLISAVAVCFGIC 100
           S +   S+  PLL  +V+M +N   E+ +    L+ +N  L  RP  ++I+ +AVCFG+C
Sbjct: 710 SNFTVRSDEFPLLTKDVVMRMNLVNERPKKSCGLVFSNRVLKYRPSFYVIALIAVCFGVC 769

Query: 99  AIVFHPHKVGEIAVTIRRCL 40
           AIV HPHKV ++AV+IRRCL
Sbjct: 770 AIVLHPHKVSKLAVSIRRCL 789


>ref|XP_003547221.1| PREDICTED: squamosa promoter-binding-like protein 7-like [Glycine
           max]
          Length = 791

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/79 (46%), Positives = 50/79 (63%)
 Frame = -3

Query: 267 DNSETAPLLNAEVIMSVNHSKEQQRMPSSLLLTNTFLPSRPLIFLISAVAVCFGICAIVF 88
           D +E  PLL  ++IMSV    E+        L   FL SRP IF+I +VAVC G+C  V 
Sbjct: 716 DKTERIPLLKRDIIMSVEELPERY---GRRCLGRGFLTSRPAIFVIVSVAVCLGVCVAVL 772

Query: 87  HPHKVGEIAVTIRRCLFDH 31
           HP +V E+AV++RRCLF++
Sbjct: 773 HPGRVSELAVSVRRCLFNY 791


Top