BLASTX nr result

ID: Bupleurum21_contig00025220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025220
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327542.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-37
ref|XP_003529871.1| PREDICTED: transmembrane 9 superfamily membe...    81   2e-37
ref|XP_002527407.1| Endosomal P24A protein precursor, putative [...    80   4e-37
ref|XP_004155934.1| PREDICTED: LOW QUALITY PROTEIN: transmembran...    81   1e-36
ref|XP_004141678.1| PREDICTED: transmembrane 9 superfamily membe...    81   1e-36

>ref|XP_002327542.1| predicted protein [Populus trichocarpa] gi|222836096|gb|EEE74517.1|
           predicted protein [Populus trichocarpa]
          Length = 639

 Score = 80.9 bits (198), Expect(3) = 2e-37
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   KESDIKWASRWDTYLLMNDDQVHWFSIVNSLMIVLFL 112
           KESDIKWASRWDTYLLMNDDQ+HWFSI+NSLMIVLFL
Sbjct: 254 KESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFL 290



 Score = 80.1 bits (196), Expect(3) = 2e-37
 Identities = 41/47 (87%), Positives = 42/47 (89%)
 Frame = +1

Query: 115 MVAMIMMRTLYS*DIANYYQLEIQDEAQEETGWKLVHGDVFRAPESS 255
           MVAMIMMRTLY  DIANY QLE QDEAQEETGWKLVHGDVFRAP +S
Sbjct: 293 MVAMIMMRTLYR-DIANYNQLETQDEAQEETGWKLVHGDVFRAPINS 338



 Score = 41.6 bits (96), Expect(3) = 2e-37
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +3

Query: 261 TGVQIFAMTIITMIFALLRFLSP 329
           TGVQIF MT++TMIFALL FLSP
Sbjct: 347 TGVQIFGMTLVTMIFALLGFLSP 369


>ref|XP_003529871.1| PREDICTED: transmembrane 9 superfamily member 4-like [Glycine max]
          Length = 640

 Score = 80.9 bits (198), Expect(3) = 2e-37
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   KESDIKWASRWDTYLLMNDDQVHWFSIVNSLMIVLFL 112
           KESDIKWASRWDTYLLMNDDQ+HWFSI+NSLMIVLFL
Sbjct: 255 KESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFL 291



 Score = 78.2 bits (191), Expect(3) = 2e-37
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +1

Query: 115 MVAMIMMRTLYS*DIANYYQLEIQDEAQEETGWKLVHGDVFRAPESS 255
           MVAMIMMRTLY  DIANY QLE QDEAQEETGWKLVHGD+FR P +S
Sbjct: 294 MVAMIMMRTLYR-DIANYNQLETQDEAQEETGWKLVHGDIFRPPVNS 339



 Score = 43.1 bits (100), Expect(3) = 2e-37
 Identities = 20/23 (86%), Positives = 22/23 (95%)
 Frame = +3

Query: 261 TGVQIFAMTIITMIFALLRFLSP 329
           TGVQIFAMT++TMIFALL FLSP
Sbjct: 348 TGVQIFAMTLVTMIFALLGFLSP 370


>ref|XP_002527407.1| Endosomal P24A protein precursor, putative [Ricinus communis]
           gi|223533217|gb|EEF34973.1| Endosomal P24A protein
           precursor, putative [Ricinus communis]
          Length = 639

 Score = 80.1 bits (196), Expect(3) = 4e-37
 Identities = 41/47 (87%), Positives = 42/47 (89%)
 Frame = +1

Query: 115 MVAMIMMRTLYS*DIANYYQLEIQDEAQEETGWKLVHGDVFRAPESS 255
           MVAMIMMRTLY  DIANY QLE QDEAQEETGWKLVHGDVFRAP +S
Sbjct: 293 MVAMIMMRTLYR-DIANYNQLETQDEAQEETGWKLVHGDVFRAPINS 338



 Score = 79.3 bits (194), Expect(3) = 4e-37
 Identities = 34/37 (91%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   KESDIKWASRWDTYLLMNDDQVHWFSIVNSLMIVLFL 112
           KES+IKWASRWDTYLLMNDDQ+HWFSI+NSLMIVLFL
Sbjct: 254 KESEIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFL 290



 Score = 41.6 bits (96), Expect(3) = 4e-37
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +3

Query: 261 TGVQIFAMTIITMIFALLRFLSP 329
           TGVQIF MT++TMIFALL FLSP
Sbjct: 347 TGVQIFGMTLVTMIFALLGFLSP 369


>ref|XP_004155934.1| PREDICTED: LOW QUALITY PROTEIN: transmembrane 9 superfamily member
           4-like [Cucumis sativus]
          Length = 643

 Score = 80.9 bits (198), Expect(3) = 1e-36
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   KESDIKWASRWDTYLLMNDDQVHWFSIVNSLMIVLFL 112
           KESDIKWASRWDTYLLMNDDQ+HWFSI+NSLMIVLFL
Sbjct: 258 KESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFL 294



 Score = 77.0 bits (188), Expect(3) = 1e-36
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +1

Query: 115 MVAMIMMRTLYS*DIANYYQLEIQDEAQEETGWKLVHGDVFRAPESS 255
           MVAMIMMRTLY  DIANY QL+ QDEAQEETGWKLVHGDVFR P +S
Sbjct: 297 MVAMIMMRTLYR-DIANYNQLDAQDEAQEETGWKLVHGDVFRPPINS 342



 Score = 41.6 bits (96), Expect(3) = 1e-36
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +3

Query: 261 TGVQIFAMTIITMIFALLRFLSP 329
           TGVQIF MT++TMIFALL FLSP
Sbjct: 351 TGVQIFGMTLVTMIFALLGFLSP 373


>ref|XP_004141678.1| PREDICTED: transmembrane 9 superfamily member 4-like [Cucumis
           sativus]
          Length = 643

 Score = 80.9 bits (198), Expect(3) = 1e-36
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = +2

Query: 2   KESDIKWASRWDTYLLMNDDQVHWFSIVNSLMIVLFL 112
           KESDIKWASRWDTYLLMNDDQ+HWFSI+NSLMIVLFL
Sbjct: 258 KESDIKWASRWDTYLLMNDDQIHWFSIINSLMIVLFL 294



 Score = 77.0 bits (188), Expect(3) = 1e-36
 Identities = 39/47 (82%), Positives = 41/47 (87%)
 Frame = +1

Query: 115 MVAMIMMRTLYS*DIANYYQLEIQDEAQEETGWKLVHGDVFRAPESS 255
           MVAMIMMRTLY  DIANY QL+ QDEAQEETGWKLVHGDVFR P +S
Sbjct: 297 MVAMIMMRTLYR-DIANYNQLDAQDEAQEETGWKLVHGDVFRPPINS 342



 Score = 41.6 bits (96), Expect(3) = 1e-36
 Identities = 19/23 (82%), Positives = 21/23 (91%)
 Frame = +3

Query: 261 TGVQIFAMTIITMIFALLRFLSP 329
           TGVQIF MT++TMIFALL FLSP
Sbjct: 351 TGVQIFGMTLVTMIFALLGFLSP 373


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