BLASTX nr result

ID: Bupleurum21_contig00025206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025206
         (1351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA61785.1| SKP1-like protein 3 [Petunia x hybrida]                 64   1e-07
gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. ...    64   1e-07
gb|AAD34458.1| Skp1 [Medicago sativa]                                  63   2e-07
ref|NP_001235349.1| uncharacterized protein LOC100306458 [Glycin...    63   2e-07
gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium]                      62   4e-07

>gb|ACA61785.1| SKP1-like protein 3 [Petunia x hybrida]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
 Frame = +2

Query: 905  FTVEEDVALQFQSLKDQIKRSDDIAPR-IKLPGISRSTLRKVISHFGVQVYPN------- 1060
            F VEE VAL+ Q++K  I+  DD A   I LP ++   L KVI +    V  N       
Sbjct: 17   FQVEESVALESQTIKHMIE--DDCADTSIPLPNVTSKILAKVIEYCKRHVEANKAEDKAS 74

Query: 1061 -------ESDFVYHD--SLINLIQAAHFFKIKSLMDFTCQTLVHKVRAKHTKNIMIEFNT 1213
                   +SDFV  D  +L +LI AA++  IKSL+D TCQT+   ++ K  + I   FN 
Sbjct: 75   EDELKSFDSDFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNI 134

Query: 1214 AHINYPQSHDCVLRQ 1258
             +   P+  + V R+
Sbjct: 135  KNDFTPEEEEEVRRE 149


>gb|ABB77425.1| Skp1-like protein 3 [Petunia integrifolia subsp. inflata]
            gi|253796264|gb|ACT35736.1| SKP1-like 2 [Petunia x
            hybrida]
          Length = 155

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 17/135 (12%)
 Frame = +2

Query: 905  FTVEEDVALQFQSLKDQIKRSDDIAPR-IKLPGISRSTLRKVISHFGVQVYPN------- 1060
            F VEE VAL+ Q++K  I+  DD A   I LP ++   L KVI +    V  N       
Sbjct: 17   FQVEESVALESQTIKHMIE--DDCADTSIPLPNVTSKILAKVIEYCKRHVEANKSEDKAS 74

Query: 1061 -------ESDFVYHD--SLINLIQAAHFFKIKSLMDFTCQTLVHKVRAKHTKNIMIEFNT 1213
                   +SDFV  D  +L +LI AA++  IKSL+D TCQT+   ++ K  + I   FN 
Sbjct: 75   EDELKSFDSDFVKVDQGTLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNI 134

Query: 1214 AHINYPQSHDCVLRQ 1258
             +   P+  + V R+
Sbjct: 135  KNDFTPEEEEEVRRE 149


>gb|AAD34458.1| Skp1 [Medicago sativa]
          Length = 153

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 17/150 (11%)
 Frame = +2

Query: 866  RKIELVPCDSPIGFTVEEDVALQFQSLKDQIKRSDDIAPR-IKLPGISRSTLRKVISHFG 1042
            RKI L   D    F V+E VAL+ Q++K  I+  DD A   I LP ++   L KVI +  
Sbjct: 3    RKITLKSSDGET-FEVDEAVALESQTIKHMIE--DDCADSGIPLPNVTSKILAKVIEYCK 59

Query: 1043 VQV-------YPNE-------SDFVYHD--SLINLIQAAHFFKIKSLMDFTCQTLVHKVR 1174
              V        PNE       S+FV  D  +L +LI AA++  IKSL+D TCQT+   ++
Sbjct: 60   KHVDAAAAEDKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 119

Query: 1175 AKHTKNIMIEFNTAHINYPQSHDCVLRQRR 1264
             K  + I   FN  +   P+  + V R+ +
Sbjct: 120  GKTPEEIRKTFNIKNDFSPEEEEEVRRENQ 149


>ref|NP_001235349.1| uncharacterized protein LOC100306458 [Glycine max]
            gi|255628601|gb|ACU14645.1| unknown [Glycine max]
          Length = 155

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 51/150 (34%), Positives = 74/150 (49%), Gaps = 17/150 (11%)
 Frame = +2

Query: 866  RKIELVPCDSPIGFTVEEDVALQFQSLKDQIKRSDDIAPR-IKLPGISRSTLRKVISHFG 1042
            +KI L   D    F VEE VAL+ Q++K  I+  DD A   I LP ++   L KVI +  
Sbjct: 5    KKITLKSSDGE-AFEVEEAVALESQTIKHMIE--DDCADSGIPLPNVTSKILAKVIEYCK 61

Query: 1043 VQVYPNESD--------------FVYHD--SLINLIQAAHFFKIKSLMDFTCQTLVHKVR 1174
              V  N +D              FV  D  +L +LI AA++  IKSL+D TCQT+   ++
Sbjct: 62   KHVEANSADEKPSEDVLKAWDVDFVNVDQATLFDLILAANYLNIKSLLDLTCQTVADMIK 121

Query: 1175 AKHTKNIMIEFNTAHINYPQSHDCVLRQRR 1264
             K  + I   FN  +   P+  + V R+ +
Sbjct: 122  GKTPEEIRKTFNIKNDFTPEEEEEVRRENQ 151


>gb|AFJ21662.1| Skp1-like protein 1 [Prunus avium]
          Length = 156

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
 Frame = +2

Query: 863  ERKIELVPCDSPIGFTVEEDVALQFQSLKDQIKRSDDIAPR-IKLPGISRSTLRKVISHF 1039
            ERKI L   D    F V+E VAL+ Q++K  ++  DD A   I LP ++   L KVI + 
Sbjct: 4    ERKITLKSSDGET-FEVDEAVALESQTIKHMVE--DDCADNGIPLPNVTSKILAKVIEYC 60

Query: 1040 GVQV-------YPN--------ESDFVYHD--SLINLIQAAHFFKIKSLMDFTCQTLVHK 1168
               V        P+        ++DFV  D  +L +LI AA++  IKSL+D TCQT+   
Sbjct: 61   KKHVDAAKPDDRPSNDEDLKAWDTDFVKIDQATLFDLILAANYLNIKSLLDLTCQTVADM 120

Query: 1169 VRAKHTKNIMIEFNTAHINYPQSHDCVLRQRR 1264
            ++ K  + I   FN  +   P+  + V R+ +
Sbjct: 121  IKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQ 152


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