BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025205
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   105   5e-21
ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   101   7e-20
ref|XP_003528704.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   100   2e-19
emb|CBI33105.3| unnamed protein product [Vitis vinifera]               98   6e-19
ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...    98   6e-19

>ref|XP_003529662.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/146 (37%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
 Frame = +3

Query: 3   DDSSSSTVVRMRTD---ADDXXXXXXXPNVFDARSSDSDRPHSESHLQLFIKTISGGPKT 173
           +D S    VRMR D   A +        +  DA    S +    SH+Q F++ +S G  T
Sbjct: 33  EDFSDLVCVRMRKDEAKAVNSWSASSSSSSSDAGGCSSLQQQQRSHIQFFVRMMSAG-NT 91

Query: 174 LVLQADSTETVEHILQRIETKTRIRVADQRLICQGKQLSCDRTLAECGIEDESHLQLIGG 353
           +V+QA   +TV+ I +RI++   I + +QRLI +GKQL  ++TLAEC I+++++LQL+G 
Sbjct: 92  IVMQAFPEDTVKSIHERIQSMKGIPLFEQRLIYRGKQLQWEQTLAECFIQNDANLQLVGR 151

Query: 354 MWSTKYPEVWELVNEVLQLIFQICRG 431
           M ST++P+ W+++N+++ L++++CRG
Sbjct: 152 MRSTEHPQAWQVINDMVSLVYRLCRG 177


>ref|XP_003549564.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 867

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/148 (36%), Positives = 94/148 (63%), Gaps = 5/148 (3%)
 Frame = +3

Query: 3   DDSSSSTVVRMRTDADDXXXXXXXPNVFDARSSDSD-----RPHSESHLQLFIKTISGGP 167
           +D S    VRMR D           N + A SSD+      +    SH+Q F++ + GG 
Sbjct: 33  EDFSDLVCVRMRKDEAKAV------NSWSASSSDAGGCSALQRQQRSHIQFFVRMMCGG- 85

Query: 168 KTLVLQADSTETVEHILQRIETKTRIRVADQRLICQGKQLSCDRTLAECGIEDESHLQLI 347
            T+V+QA   ++V+ I +RI++   I + +QRLI +GKQL  ++TLAEC I+++++LQL+
Sbjct: 86  NTIVMQAFPEDSVKSIHERIQSMKGIPLFEQRLIYRGKQLQWEQTLAECSIQNDANLQLV 145

Query: 348 GGMWSTKYPEVWELVNEVLQLIFQICRG 431
           G M ST++P+ W+++N+++ L++++C G
Sbjct: 146 GRMRSTEHPQAWQVINDMVSLVYRLCCG 173


>ref|XP_003528704.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Glycine max]
          Length = 697

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/115 (39%), Positives = 84/115 (73%)
 Frame = +3

Query: 87  DARSSDSDRPHSESHLQLFIKTISGGPKTLVLQADSTETVEHILQRIETKTRIRVADQRL 266
           +A++  +      SH+Q F++ +S G  T+V+QA   +TV+ I +RI++   I + +QRL
Sbjct: 5   EAKAPGAMPQQQRSHIQFFVRMMSAG-NTIVMQAFPEDTVKSIHERIQSMKGIPLFEQRL 63

Query: 267 ICQGKQLSCDRTLAECGIEDESHLQLIGGMWSTKYPEVWELVNEVLQLIFQICRG 431
           I +GKQL  ++TLAEC I+++++LQL+G M ST++P+ W+++N+++ L++++CRG
Sbjct: 64  IYRGKQLQWEQTLAECFIQNDANLQLVGRMRSTEHPQAWQVINDMVSLVYRLCRG 118


>emb|CBI33105.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
 Frame = +3

Query: 81  VFDARS------SDSDRPHSESHLQLFIKTISGGPKTLVLQADSTETVEHILQRIETKTR 242
           V DARS      ++S RP  +S LQ F++ IS G  TLV+ A+S +TVE +  RI++ T 
Sbjct: 25  VVDARSCPSSCSAESARP--DSRLQFFVRMISEG-NTLVIHANSDDTVESLHHRIQSITG 81

Query: 243 IRVADQRLICQGKQLSCDRTLAECGIEDESHLQLIGGMWSTKYPEVWELVNEVLQLIFQI 422
           I V +QRLI +GKQL  +++LAEC I++++ LQL+G M ST++P  W + +E++  I ++
Sbjct: 82  IPVMEQRLIYRGKQLQWEQSLAECSIQNDAGLQLVGRMRSTEHPAAWRVASEMVSTICRL 141

Query: 423 CRG 431
           CRG
Sbjct: 142 CRG 144


>ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Vitis vinifera]
          Length = 893

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 55/123 (44%), Positives = 84/123 (68%), Gaps = 6/123 (4%)
 Frame = +3

Query: 81  VFDARS------SDSDRPHSESHLQLFIKTISGGPKTLVLQADSTETVEHILQRIETKTR 242
           V DARS      ++S RP  +S LQ F++ IS G  TLV+ A+S +TVE +  RI++ T 
Sbjct: 68  VVDARSCPSSCSAESARP--DSRLQFFVRMISEG-NTLVIHANSDDTVESLHHRIQSITG 124

Query: 243 IRVADQRLICQGKQLSCDRTLAECGIEDESHLQLIGGMWSTKYPEVWELVNEVLQLIFQI 422
           I V +QRLI +GKQL  +++LAEC I++++ LQL+G M ST++P  W + +E++  I ++
Sbjct: 125 IPVMEQRLIYRGKQLQWEQSLAECSIQNDAGLQLVGRMRSTEHPAAWRVASEMVSTICRL 184

Query: 423 CRG 431
           CRG
Sbjct: 185 CRG 187