BLASTX nr result

ID: Bupleurum21_contig00025190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025190
         (755 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275676.1| PREDICTED: uncharacterized protein LOC100267...   196   6e-48
ref|XP_004146493.1| PREDICTED: uncharacterized protein LOC101203...   189   7e-46
ref|XP_002863981.1| hypothetical protein ARALYDRAFT_357185 [Arab...   180   3e-43
gb|AAM65960.1| unknown [Arabidopsis thaliana]                         179   4e-43
ref|NP_199752.1| uncharacterized protein [Arabidopsis thaliana] ...   179   4e-43

>ref|XP_002275676.1| PREDICTED: uncharacterized protein LOC100267751 [Vitis vinifera]
           gi|297735090|emb|CBI17452.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score =  196 bits (497), Expect = 6e-48
 Identities = 91/119 (76%), Positives = 101/119 (84%)
 Frame = -2

Query: 583 MFATIVRYVGKKPKPKMKPIELKTPMEQTQTITRVIYDIVKEHGPLTIADTWERVKEVGV 404
           MFAT +RY+ KKPKPK KPIELKTP EQT+T+TRVI+DIVKEHGPLTIADTWE V++VG+
Sbjct: 1   MFATAIRYLAKKPKPKQKPIELKTPPEQTKTLTRVIFDIVKEHGPLTIADTWEHVQQVGL 60

Query: 403 RGLTSKRHMKIVLRWMRERQKLSQICNHVGPQKQFLYTTWFTKPNIKQTGAGSASPQPK 227
           RGLTSKRHMKIVLRWMRERQKL  ICNHVGP KQFLYTTWF K N+ Q    + S  PK
Sbjct: 61  RGLTSKRHMKIVLRWMRERQKLRLICNHVGPHKQFLYTTWFAKSNVNQPKPANGSSLPK 119


>ref|XP_004146493.1| PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus]
           gi|449521243|ref|XP_004167639.1| PREDICTED:
           uncharacterized protein LOC101228732 [Cucumis sativus]
          Length = 122

 Score =  189 bits (479), Expect = 7e-46
 Identities = 87/108 (80%), Positives = 96/108 (88%)
 Frame = -2

Query: 583 MFATIVRYVGKKPKPKMKPIELKTPMEQTQTITRVIYDIVKEHGPLTIADTWERVKEVGV 404
           MF T VR    KPKPKMKPIELKTP EQTQTITR I+DIVKEHGPLTIA+TW+RV+EVG+
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQEVGL 60

Query: 403 RGLTSKRHMKIVLRWMRERQKLSQICNHVGPQKQFLYTTWFTKPNIKQ 260
           RGLTSKRHMKIV+RWMRERQK+  +CNHVGP KQFLYTTWFTKPN +Q
Sbjct: 61  RGLTSKRHMKIVMRWMRERQKIRLMCNHVGPHKQFLYTTWFTKPNFEQ 108


>ref|XP_002863981.1| hypothetical protein ARALYDRAFT_357185 [Arabidopsis lyrata subsp.
           lyrata] gi|297309816|gb|EFH40240.1| hypothetical protein
           ARALYDRAFT_357185 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score =  180 bits (457), Expect = 3e-43
 Identities = 86/122 (70%), Positives = 97/122 (79%), Gaps = 7/122 (5%)
 Frame = -2

Query: 571 IVRYVGKKPKPKMKPIELKTPMEQTQTITRVIYDIVKEHGPLTIADTWERVKEVGVRGLT 392
           + R+   KPKPKMKPIEL TP EQTQTITRVI+DI+K+HGPLTIA+TW+RVKEVG+RGLT
Sbjct: 20  LTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRGLT 79

Query: 391 SKRHMKIVLRWMRERQKLSQICNHVGPQKQFLYTTWFTK-------PNIKQTGAGSASPQ 233
           SKRHMKI+LRWMRERQKL  ICNHVGP KQFLYTTWFTK       P   +   G +S  
Sbjct: 80  SKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHNPSSKFPKSPENLTGKSSSH 139

Query: 232 PK 227
           PK
Sbjct: 140 PK 141


>gb|AAM65960.1| unknown [Arabidopsis thaliana]
          Length = 139

 Score =  179 bits (455), Expect = 4e-43
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = -2

Query: 571 IVRYVGKKPKPKMKPIELKTPMEQTQTITRVIYDIVKEHGPLTIADTWERVKEVGVRGLT 392
           + R+   KPKPKMKPIEL TP EQTQTITRVI+DI+K+HGPLTIA+TW+RVKEVG+RGLT
Sbjct: 14  LTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRGLT 73

Query: 391 SKRHMKIVLRWMRERQKLSQICNHVGPQKQFLYTTWFTKPN 269
           SKRHMKI+LRWMRERQKL  ICNHVGP KQFLYTTWFTK N
Sbjct: 74  SKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 114


>ref|NP_199752.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79330414|ref|NP_001032044.1| uncharacterized protein
           [Arabidopsis thaliana] gi|9759424|dbj|BAB09911.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|51970274|dbj|BAD43829.1| unknown protein [Arabidopsis
           thaliana] gi|98960881|gb|ABF58924.1| At5g49410
           [Arabidopsis thaliana] gi|332008424|gb|AED95807.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332008425|gb|AED95808.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 145

 Score =  179 bits (455), Expect = 4e-43
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = -2

Query: 571 IVRYVGKKPKPKMKPIELKTPMEQTQTITRVIYDIVKEHGPLTIADTWERVKEVGVRGLT 392
           + R+   KPKPKMKPIEL TP EQTQTITRVI+DI+K+HGPLTIA+TW+RVKEVG+RGLT
Sbjct: 20  LTRHFATKPKPKMKPIELNTPPEQTQTITRVIFDILKDHGPLTIAETWDRVKEVGLRGLT 79

Query: 391 SKRHMKIVLRWMRERQKLSQICNHVGPQKQFLYTTWFTKPN 269
           SKRHMKI+LRWMRERQKL  ICNHVGP KQFLYTTWFTK N
Sbjct: 80  SKRHMKIILRWMRERQKLKLICNHVGPHKQFLYTTWFTKHN 120


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