BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025178
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       192   3e-47
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                192   4e-47
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]               192   6e-47
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   191   1e-46
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...   189   4e-46

>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  192 bits (489), Expect = 3e-47
 Identities = 92/215 (42%), Positives = 133/215 (61%)
 Frame = +1

Query: 1    WSIMAADFVKGVQSFFNTLSLPRMINAAAIALVPKTVCPATMNDYRPISCCNTIYKCISK 180
            WSI+ A+    ++ FF++  L +  NA  I L+PK V P   +D+RPISC NT+YK I++
Sbjct: 479  WSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIAR 538

Query: 181  IIASRIKHVIGDLISPNQTAFVPQRSIGDNIFLAQALCSNYNADKSPPRFAMKMDLLKAF 360
            ++  R++ ++  +IS  Q+AF+P RS+ +N+ LA  L   YN     PR  +K+DL KAF
Sbjct: 539  LLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAF 598

Query: 361  DSVSWKFLLSVLERMHFSRLIIKWIEKCLETAMLSVKLNGSLEGFFNMKMGLRQGDPLSP 540
            DSV W+F+++ L  +      I WI +C+ T   +V +NG   GFF    GLRQGDPLSP
Sbjct: 599  DSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSP 658

Query: 541  LLFVIAMEAFTAIIHKETSSPLFSFHHNAENPRIS 645
             LFV+AMEAF+ ++H    S L  +H  A N  IS
Sbjct: 659  YLFVLAMEAFSNLLHSRYESGLIHYHPKASNLSIS 693


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  192 bits (488), Expect = 4e-47
 Identities = 97/194 (50%), Positives = 127/194 (65%)
 Frame = +1

Query: 1   WSIMAADFVKGVQSFFNTLSLPRMINAAAIALVPKTVCPATMNDYRPISCCNTIYKCISK 180
           WSI   DF+  ++SFF    LP+ +NA  +AL+PK      M DYRPISCCN IYK ISK
Sbjct: 58  WSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISK 117

Query: 181 IIASRIKHVIGDLISPNQTAFVPQRSIGDNIFLAQALCSNYNADKSPPRFAMKMDLLKAF 360
           IIA+R+K ++   I  NQ+AFV +R + +N+ LA  L  +Y+ D   PR AMK+D+ KAF
Sbjct: 118 IIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAF 177

Query: 361 DSVSWKFLLSVLERMHFSRLIIKWIEKCLETAMLSVKLNGSLEGFFNMKMGLRQGDPLSP 540
           DSV W+FLL+ LE ++F      WI+ C+ TA  SV++NG L GFF  K GLRQG  LSP
Sbjct: 178 DSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSP 237

Query: 541 LLFVIAMEAFTAII 582
            LFVI M   + +I
Sbjct: 238 YLFVICMNVLSHMI 251


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score =  192 bits (487), Expect = 6e-47
 Identities = 97/206 (47%), Positives = 129/206 (62%)
 Frame = +1

Query: 1   WSIMAADFVKGVQSFFNTLSLPRMINAAAIALVPKTVCPATMNDYRPISCCNTIYKCISK 180
           W I+  +F   VQSFF    LP+ IN+  +AL+PK +    M DYRPISCCN +YK ISK
Sbjct: 132 WDIIGQEFTLPVQSFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISK 191

Query: 181 IIASRIKHVIGDLISPNQTAFVPQRSIGDNIFLAQALCSNYNADKSPPRFAMKMDLLKAF 360
           IIA+R+K ++   I+ NQ+AFV  R + +N+ LA  L  +Y+ D    R A+K+D+ KAF
Sbjct: 192 IIANRLKLLLPRFIAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAF 251

Query: 361 DSVSWKFLLSVLERMHFSRLIIKWIEKCLETAMLSVKLNGSLEGFFNMKMGLRQGDPLSP 540
           DSV W FL + L  M+FS   I WI  C+ TA  SV++NG L G+F  K GLRQG  LSP
Sbjct: 252 DSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSP 311

Query: 541 LLFVIAMEAFTAIIHKETSSPLFSFH 618
            LFVI M+  + ++ K      F FH
Sbjct: 312 YLFVICMDVLSKMLDKAAGVRKFGFH 337


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  191 bits (484), Expect = 1e-46
 Identities = 95/210 (45%), Positives = 130/210 (61%)
 Frame = +1

Query: 1    WSIMAADFVKGVQSFFNTLSLPRMINAAAIALVPKTVCPATMNDYRPISCCNTIYKCISK 180
            WS+   DF+  +QSFF    LP+ +NA  +AL+PK      M DYRPISCCN +YK ISK
Sbjct: 782  WSLTGPDFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISK 841

Query: 181  IIASRIKHVIGDLISPNQTAFVPQRSIGDNIFLAQALCSNYNADKSPPRFAMKMDLLKAF 360
            I+A+R+K ++   I  NQ+AFV +R + +N+ LA  L  +Y+ +   PR AMK+D+ KAF
Sbjct: 842  ILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAF 901

Query: 361  DSVSWKFLLSVLERMHFSRLIIKWIEKCLETAMLSVKLNGSLEGFFNMKMGLRQGDPLSP 540
            DSV W+FLL+ LE ++F      WI+ C+ TA  SV++NG L GFF    GLRQG  LSP
Sbjct: 902  DSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSP 961

Query: 541  LLFVIAMEAFTAIIHKETSSPLFSFHHNAE 630
             LFVI M   + +I +        +H   E
Sbjct: 962  YLFVICMNVLSHMIDEAAVHRNIGYHPKCE 991


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score =  189 bits (480), Expect = 4e-46
 Identities = 95/206 (46%), Positives = 132/206 (64%)
 Frame = +1

Query: 1   WSIMAADFVKGVQSFFNTLSLPRMINAAAIALVPKTVCPATMNDYRPISCCNTIYKCISK 180
           W+I+ A+F+  +QSFF    LP+ IN+  +AL+PK      M DYRPISCCN +YK ISK
Sbjct: 373 WNIIGAEFILAIQSFFAKGFLPKGINSTILALIPKKKEAKEMKDYRPISCCNVLYKVISK 432

Query: 181 IIASRIKHVIGDLISPNQTAFVPQRSIGDNIFLAQALCSNYNADKSPPRFAMKMDLLKAF 360
           IIA+R+K V+   I  NQ+AFV  R + +N+ LA  +  +Y+ D    R A+K+D+ KAF
Sbjct: 433 IIANRLKLVLPKFIVGNQSAFVKDRLLIENVLLATEIVKDYHKDSVSSRCALKIDISKAF 492

Query: 361 DSVSWKFLLSVLERMHFSRLIIKWIEKCLETAMLSVKLNGSLEGFFNMKMGLRQGDPLSP 540
           DSV WKFL++VLE M+F      WI  C+ TA  SV++NG L G F+    LRQG  LSP
Sbjct: 493 DSVQWKFLINVLEAMNFPPEFTHWITLCITTASFSVQVNGELAGVFSSARELRQGCSLSP 552

Query: 541 LLFVIAMEAFTAIIHKETSSPLFSFH 618
            LFVI+M+  + ++ K   +  F +H
Sbjct: 553 YLFVISMDVLSKMLDKAVGARQFGYH 578