BLASTX nr result

ID: Bupleurum21_contig00025164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025164
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37639.3| unnamed protein product [Vitis vinifera]              394   e-107
ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253...   367   3e-99
ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago t...   360   3e-97
ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788...   352   7e-95
ref|XP_002521724.1| conserved hypothetical protein [Ricinus comm...   347   2e-93

>emb|CBI37639.3| unnamed protein product [Vitis vinifera]
          Length = 1230

 Score =  394 bits (1012), Expect = e-107
 Identities = 206/328 (62%), Positives = 241/328 (73%)
 Frame = -2

Query: 1057 IKPLPETVKSSVCSGVVVFDLTRVVEELIYNSLDAGATKVSVAVAVGTGYIKVTDNGCGI 878
            IKPLPE V SSV SG+++FDLTRVVEELIYNSLDAGATKVSV+V+VGT YIKV D+G G+
Sbjct: 4    IKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDGTGV 63

Query: 877  TRDGLVLLGERYATSKSDELADMDTTTGSFGFRGEALGSIADVSLLEVVTKAHGRPNGYR 698
            TRDGLVLLGERYATSK   L +MD  TGSFGFRGEALGSI+DVSLLE+VTK  GRPNGYR
Sbjct: 64   TRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRPNGYR 123

Query: 697  KVMKGCKCLYLGIDDNRHDVGTTVIIQDLFYNQPVRRKQLQSSPRKVLHILKECVLKIAL 518
            KVMKGCKCLYLGIDD+R DVGTTV+++DLFYNQPVRRK LQSSP+KVLH +K+CV +IAL
Sbjct: 124  KVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCVFRIAL 183

Query: 517  IHLKVSINVFDMESEVELLCTHXXXXXXXXXXXXXXXXXSISLHEFDVSDGTLKISGYIS 338
            +H  VS  V D+ES+ ELLCT                  S SLHE +++DG LK+SGY+S
Sbjct: 184  VHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKLSGYVS 243

Query: 337  GPCETIGGKAVQYVYINSRFVGKGPIHKLLSQLAAKFDNLGLCSDNNGSSNGKRFKMQNN 158
            GPC T   KA QYV I+                   FD       ++GS + KR + Q  
Sbjct: 244  GPCNTFSIKAFQYVCIH----------------VYSFDP---WKASSGSQDKKRSRCQGY 284

Query: 157  PSYILNLGCPSSLYNLTFEPSKTSAEFK 74
            P+YILNL CP S Y+LTFEPS+T+ EFK
Sbjct: 285  PTYILNLRCPQSHYDLTFEPSRTAVEFK 312


>ref|XP_002272829.2| PREDICTED: uncharacterized protein LOC100253902 [Vitis vinifera]
          Length = 1218

 Score =  367 bits (942), Expect = 3e-99
 Identities = 194/328 (59%), Positives = 228/328 (69%)
 Frame = -2

Query: 1057 IKPLPETVKSSVCSGVVVFDLTRVVEELIYNSLDAGATKVSVAVAVGTGYIKVTDNGCGI 878
            IKPLPE V SSV SG+++FDLTRVVEELIYNSLDAGATKVSV+V+VGT YIKV D+G G+
Sbjct: 4    IKPLPEAVHSSVRSGIILFDLTRVVEELIYNSLDAGATKVSVSVSVGTCYIKVVDDGTGV 63

Query: 877  TRDGLVLLGERYATSKSDELADMDTTTGSFGFRGEALGSIADVSLLEVVTKAHGRPNGYR 698
            TRDGLVLLGERYATSK   L +MD  TGSFGFRGEALGSI+DVSLLE+VTK  GRPNGYR
Sbjct: 64   TRDGLVLLGERYATSKLHHLTEMDAATGSFGFRGEALGSISDVSLLEIVTKTQGRPNGYR 123

Query: 697  KVMKGCKCLYLGIDDNRHDVGTTVIIQDLFYNQPVRRKQLQSSPRKVLHILKECVLKIAL 518
            KVMKGCKCLYLGIDD+R DVGTTV+++DLFYNQPVRRK LQSSP+KVLH +K+CV +IAL
Sbjct: 124  KVMKGCKCLYLGIDDDRQDVGTTVVVRDLFYNQPVRRKYLQSSPKKVLHSVKKCVFRIAL 183

Query: 517  IHLKVSINVFDMESEVELLCTHXXXXXXXXXXXXXXXXXSISLHEFDVSDGTLKISGYIS 338
            +H  VS  V D+ES+ ELLCT                  S SLHE +++DG LK+SGY  
Sbjct: 184  VHSNVSFKVVDIESDDELLCTKSSSSPLSLLISGLGIEDSSSLHELNITDGILKLSGYSF 243

Query: 337  GPCETIGGKAVQYVYINSRFVGKGPIHKLLSQLAAKFDNLGLCSDNNGSSNGKRFKMQNN 158
             P +                                         ++GS + KR + Q  
Sbjct: 244  DPWKA----------------------------------------SSGSQDKKRSRCQGY 263

Query: 157  PSYILNLGCPSSLYNLTFEPSKTSAEFK 74
            P+YILNL CP S Y+LTFEPS+T+ EFK
Sbjct: 264  PTYILNLRCPQSHYDLTFEPSRTAVEFK 291


>ref|XP_003612368.1| MutL DNA mismatch repair protein [Medicago truncatula]
            gi|355513703|gb|AES95326.1| MutL DNA mismatch repair
            protein [Medicago truncatula]
          Length = 1293

 Score =  360 bits (925), Expect = 3e-97
 Identities = 191/375 (50%), Positives = 249/375 (66%), Gaps = 47/375 (12%)
 Frame = -2

Query: 1057 IKPLPETVKSSVCSGVVVFDLTRVVEELIYNSLDAGATKVSVAVAVGTGYIKVTDNGCGI 878
            ++PLPE+V+SS+ S   +FD TR+VEEL+YNSLDA ATKVSV V +G+ Y+KV D+G GI
Sbjct: 4    VRPLPESVRSSIRSAFSLFDFTRIVEELVYNSLDARATKVSVFVDIGSCYLKVVDDGGGI 63

Query: 877  TRDGLVLLGERY-------ATSKSDELADMDTTTGSFGFRGEALGSIADVSLLEVVTKAH 719
            TRDGL L+GERY       ATSK   LAD++ T+ +FGFRGEAL SI++VSLLE+VT+A+
Sbjct: 64   TRDGLELVGERYGVYSFNFATSKFLNLADLNATSENFGFRGEALASISEVSLLEIVTRAY 123

Query: 718  GRPNGYRKVMKGCKCLYLGIDDNRHDVGTTVIIQDLFYNQPVRRKQLQSSPRKVLHILKE 539
            GRPNGYRKV+KGCKC+YLGIDD+R +VGTTVI+ ++FYNQPVRRKQ+QSSP KVL  +K+
Sbjct: 124  GRPNGYRKVLKGCKCIYLGIDDDRKEVGTTVIVSEIFYNQPVRRKQIQSSPNKVLQSIKK 183

Query: 538  CVLKIALIHLKVSINVFDMESEVELLCTHXXXXXXXXXXXXXXXXXSISLHEFDVSDGTL 359
            CV+++AL+   +S  V D+E E EL C+H                 + SLHE +V +  +
Sbjct: 184  CVMRLALVCPNISFKVVDIEREYELFCSHSAASPLSLVTTGFGVEVTNSLHELEVENDII 243

Query: 358  KISGYISGPCETIGGKAVQ----------------------------------------Y 299
            K++GYISGPC T+  K +                                         +
Sbjct: 244  KLTGYISGPCNTLDMKVIHISNAKSQSPISSHRNFWYKMDLLSLEKESNDINICSLTLTW 303

Query: 298  VYINSRFVGKGPIHKLLSQLAAKFDNLGLCSDNNGSSNGKRFKMQNNPSYILNLGCPSSL 119
            + INS+FV KGP+HKLLSQLA +F++    S +N S N KR + Q  P+YILNL CP SL
Sbjct: 304  LDINSQFVCKGPVHKLLSQLAIRFEHRNSWSADNESQNKKRGRFQPCPAYILNLRCPRSL 363

Query: 118  YNLTFEPSKTSAEFK 74
            Y L+FEPSKT  EFK
Sbjct: 364  YVLSFEPSKTYVEFK 378


>ref|XP_003516521.1| PREDICTED: uncharacterized protein LOC100788019 [Glycine max]
          Length = 1208

 Score =  352 bits (904), Expect = 7e-95
 Identities = 178/328 (54%), Positives = 231/328 (70%)
 Frame = -2

Query: 1057 IKPLPETVKSSVCSGVVVFDLTRVVEELIYNSLDAGATKVSVAVAVGTGYIKVTDNGCGI 878
            IKPLPE V+SS+ SG+ +FD TRVVEEL++NSLDA ATKVSV V+  + Y+KV D+G GI
Sbjct: 4    IKPLPEAVRSSLRSGIFLFDFTRVVEELVFNSLDARATKVSVFVSTRSCYLKVVDDGSGI 63

Query: 877  TRDGLVLLGERYATSKSDELADMDTTTGSFGFRGEALGSIADVSLLEVVTKAHGRPNGYR 698
             RD L L+GERYATSK   L D++ T+ +FGFRGEAL SI++VSLLE+VTK +GRPNGYR
Sbjct: 64   PRDELELVGERYATSKFLNLVDLNATSENFGFRGEALASISEVSLLEIVTKTYGRPNGYR 123

Query: 697  KVMKGCKCLYLGIDDNRHDVGTTVIIQDLFYNQPVRRKQLQSSPRKVLHILKECVLKIAL 518
            KV+KGCKCLYLGIDD+R +VGTTV+++DLFYNQPVRRK +QSSP KVL  +K C++++AL
Sbjct: 124  KVLKGCKCLYLGIDDDRKEVGTTVVVRDLFYNQPVRRKYMQSSPNKVLQSIKNCIMRLAL 183

Query: 517  IHLKVSINVFDMESEVELLCTHXXXXXXXXXXXXXXXXXSISLHEFDVSDGTLKISGYIS 338
            +   +S  V D+E E EL CTH                 + SLH  +V +  +K+SGYIS
Sbjct: 184  VRPNISFKVVDIEREDELFCTHSASSPLPLVTSGFGVEVASSLHNLEVENDIVKLSGYIS 243

Query: 337  GPCETIGGKAVQYVYINSRFVGKGPIHKLLSQLAAKFDNLGLCSDNNGSSNGKRFKMQNN 158
            GPC T+                KGP+HKL+SQLA + ++L   + +    + KR + Q  
Sbjct: 244  GPCNTV--------------YTKGPVHKLVSQLANRLEHLNSWNTDKEFRSKKRTRCQPC 289

Query: 157  PSYILNLGCPSSLYNLTFEPSKTSAEFK 74
            P+Y+LNL CP SLY+L FEPSKT  +FK
Sbjct: 290  PAYLLNLSCPRSLYDLAFEPSKTHVKFK 317


>ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis]
            gi|223539115|gb|EEF40711.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1137

 Score =  347 bits (891), Expect = 2e-93
 Identities = 184/332 (55%), Positives = 227/332 (68%)
 Frame = -2

Query: 1057 IKPLPETVKSSVCSGVVVFDLTRVVEELIYNSLDAGATKVSVAVAVGTGYIKVTDNGCGI 878
            IK LPE+V++S+ SG+++FDLTRVVEEL++NSLDAGA+KV V V  GT Y+KV D+GCGI
Sbjct: 4    IKRLPESVRNSMRSGIILFDLTRVVEELVFNSLDAGASKVWVYVGAGTCYVKVVDDGCGI 63

Query: 877  TRDGLVLLGERYATSKSDELADMDTTTGSFGFRGEALGSIADVSLLEVVTKAHGRPNGYR 698
            +RDGLVLLG+RY TSK    ADMD    SFGFRGEAL SI+DVSLLE++TKA GRPNGYR
Sbjct: 64   SRDGLVLLGQRYVTSKLHHFADMDAANESFGFRGEALASISDVSLLEIITKARGRPNGYR 123

Query: 697  KVMKGCKCLYLGIDDNRHDVGTTVIIQDLFYNQPVRRKQLQSSPRKVLHILKECVLKIAL 518
            KV+KG KCLYLG++D+R DVGTTV+++DLFYNQPVRRK +QSS +KVL  +K+C+L+IA 
Sbjct: 124  KVLKGSKCLYLGVNDDRKDVGTTVVVRDLFYNQPVRRKCMQSSLKKVLDSVKKCILRIAF 183

Query: 517  IHLKVSINVFDMESEVELLCTHXXXXXXXXXXXXXXXXXSISLHEFDVSDGTLKISGYIS 338
            +H KVS  V D+ESE ELL T                  +   HE DVS+G LK+SGYIS
Sbjct: 184  VHSKVSFKVIDIESEDELLYTRPSSALSLLMSSFGIEDLNF-FHELDVSNGVLKLSGYIS 242

Query: 337  GPCETIGGKAVQYVYINSRFVGKGPIHKLLSQLAAKFDNLGLCSDNNGSSNGKRFKMQNN 158
            GPC +                           L  KF++L     N+    GKR + Q  
Sbjct: 243  GPCNS---------------------------LTIKFESLDPWKANSIPQKGKRCRPQVC 275

Query: 157  PSYILNLGCPSSLYNLTFEPSKTSAEFKVSFP 62
            P+YILNL CP +LY+LTFEPSKT  EFK   P
Sbjct: 276  PAYILNLSCPLALYDLTFEPSKTHVEFKEWIP 307


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