BLASTX nr result
ID: Bupleurum21_contig00025151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00025151
(1570 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly pro... 223 5e-95
ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Co... 211 2e-91
ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly pro... 207 4e-91
gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assemb... 209 7e-91
ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [... 208 1e-90
>ref|XP_003553055.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
mitochondrial-like [Glycine max]
Length = 284
Score = 223 bits (569), Expect(2) = 5e-95
Identities = 131/235 (55%), Positives = 149/235 (63%), Gaps = 4/235 (1%)
Frame = -1
Query: 1312 RFCRTAQLLPSLTKALSHDPFSSRCL-FEPLGPGYRFVAPSINRCEXXXXXXXXXXXXXX 1136
R R LLP L +AL D SRCL P G Y+F+ P+ +
Sbjct: 5 RLSRRTHLLPYL-RALQTDSIESRCLSIIPKGSSYKFINPNTS----------------- 46
Query: 1135 XXXXXXXXXXIFYHESRNFMSRCDLRSVSLNSCNTMSQLRIQ---SSCSFPGSRRQYGTH 965
F R + +L + + C S L Q SCS PG R + +H
Sbjct: 47 -------FQHNFSCNIRLSKFKQELSTKPFHLCYRSSALASQYVGKSCSMPGFRH-FSSH 98
Query: 964 AATERKSQKMLIYLTGLVFAMVGLTYAAVPLYRRFCQATGYGGTVQRRESVEEKIARHAQ 785
A+ E+KS+KML+YLTGLVFAMVG TYAAVPLYRRFCQATGYGGTV RRE+VEEKIARH
Sbjct: 99 ASKEQKSRKMLLYLTGLVFAMVGCTYAAVPLYRRFCQATGYGGTVTRRETVEEKIARHDS 158
Query: 784 EGTVTNREIVVQFNADVADGMPWKFVPTQREVRVKPGESALAFYTAENRSSTPIT 620
TVT REIVVQFNAD+ADGM WKFVPTQREVRVKPGESALAFYTAEN+SSTPIT
Sbjct: 159 NNTVTTREIVVQFNADIADGMQWKFVPTQREVRVKPGESALAFYTAENKSSTPIT 213
Score = 152 bits (385), Expect(2) = 5e-95
Identities = 70/78 (89%), Positives = 77/78 (98%)
Frame = -3
Query: 569 RSSTPITGMSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDSRM 390
+SSTPITG+STYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD +M
Sbjct: 207 KSSTPITGVSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPKM 266
Query: 389 DGINNLILSYTFFKVADE 336
+GINN+ILSYTFFKV++E
Sbjct: 267 NGINNIILSYTFFKVSEE 284
>ref|NP_171743.1| cytochrome c oxidase assembly protein CtaG / Cox11 [Arabidopsis
thaliana] gi|75151034|sp|Q8GWR0.1|COX11_ARATH RecName:
Full=Cytochrome c oxidase assembly protein COX11,
mitochondrial; Flags: Precursor
gi|26452392|dbj|BAC43281.1| unknown protein [Arabidopsis
thaliana] gi|28950841|gb|AAO63344.1| At1g02410
[Arabidopsis thaliana] gi|332189306|gb|AEE27427.1|
cytochrome c oxidase assembly protein CtaG / Cox11
[Arabidopsis thaliana]
Length = 287
Score = 211 bits (536), Expect(2) = 2e-91
Identities = 107/146 (73%), Positives = 120/146 (82%)
Frame = -1
Query: 1057 SVSLNSCNTMSQLRIQSSCSFPGSRRQYGTHAATERKSQKMLIYLTGLVFAMVGLTYAAV 878
S SLNS + ++ + S+ RQY TH+ +E KSQKML YLT +VF MVGLTYAAV
Sbjct: 59 SWSLNSHSATAKSMLDSA------HRQYSTHSPSETKSQKMLYYLTAVVFGMVGLTYAAV 112
Query: 877 PLYRRFCQATGYGGTVQRRESVEEKIARHAQEGTVTNREIVVQFNADVADGMPWKFVPTQ 698
PLYR FCQATGYGGTVQR+E+VEEKIARH++ GTVT REIVVQFNADVADGM WKF PTQ
Sbjct: 113 PLYRTFCQATGYGGTVQRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQ 172
Query: 697 REVRVKPGESALAFYTAENRSSTPIT 620
REVRVKPGESALAFYTAEN+SS PIT
Sbjct: 173 REVRVKPGESALAFYTAENKSSAPIT 198
Score = 153 bits (386), Expect(2) = 2e-91
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 569 RSSTPITGMSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDSRM 390
+SS PITG+STYNVTPMKA VYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD RM
Sbjct: 192 KSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRM 251
Query: 389 DGINNLILSYTFFKVADE 336
DGINNLILSYTFFKV++E
Sbjct: 252 DGINNLILSYTFFKVSEE 269
>ref|XP_004146871.1| PREDICTED: cytochrome c oxidase assembly protein COX11,
mitochondrial-like [Cucumis sativus]
gi|449521983|ref|XP_004168008.1| PREDICTED: cytochrome c
oxidase assembly protein COX11, mitochondrial-like
[Cucumis sativus]
Length = 333
Score = 207 bits (526), Expect(2) = 4e-91
Identities = 103/122 (84%), Positives = 110/122 (90%)
Frame = -1
Query: 985 RRQYGTHAATERKSQKMLIYLTGLVFAMVGLTYAAVPLYRRFCQATGYGGTVQRRESVEE 806
+R Y T AA ERKS+ ML YL LV MVG +YAAVPLYRRFCQATGYGGTVQRRESVEE
Sbjct: 142 QRSYST-AAIERKSKNMLFYLVALVLTMVGCSYAAVPLYRRFCQATGYGGTVQRRESVEE 200
Query: 805 KIARHAQEGTVTNREIVVQFNADVADGMPWKFVPTQREVRVKPGESALAFYTAENRSSTP 626
KIARHA++GTVT R+IVVQFNADVADGMPWKF+PTQREVRVKPGESALAFYTAENRSSTP
Sbjct: 201 KIARHAKDGTVTTRDIVVQFNADVADGMPWKFIPTQREVRVKPGESALAFYTAENRSSTP 260
Query: 625 IT 620
IT
Sbjct: 261 IT 262
Score = 156 bits (394), Expect(2) = 4e-91
Identities = 72/78 (92%), Positives = 77/78 (98%)
Frame = -3
Query: 569 RSSTPITGMSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDSRM 390
RSSTPITG+STYNVTPMKAA+YFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD +M
Sbjct: 256 RSSTPITGVSTYNVTPMKAAIYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPKM 315
Query: 389 DGINNLILSYTFFKVADE 336
DGINNLILSYTFFKV++E
Sbjct: 316 DGINNLILSYTFFKVSEE 333
>gb|AAG00893.1|AC064879_11 Similar to cytochrome-c oxidase assembly protein [Arabidopsis
thaliana]
Length = 216
Score = 209 bits (532), Expect(2) = 7e-91
Identities = 101/123 (82%), Positives = 110/123 (89%)
Frame = -1
Query: 988 SRRQYGTHAATERKSQKMLIYLTGLVFAMVGLTYAAVPLYRRFCQATGYGGTVQRRESVE 809
+ RQY TH+ +E KSQKML YLT +VF MVGLTYAAVPLYR FCQATGYGGTVQR+E+VE
Sbjct: 5 AHRQYSTHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKETVE 64
Query: 808 EKIARHAQEGTVTNREIVVQFNADVADGMPWKFVPTQREVRVKPGESALAFYTAENRSST 629
EKIARH++ GTVT REIVVQFNADVADGM WKF PTQREVRVKPGESALAFYTAEN+SS
Sbjct: 65 EKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENKSSA 124
Query: 628 PIT 620
PIT
Sbjct: 125 PIT 127
Score = 153 bits (386), Expect(2) = 7e-91
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 569 RSSTPITGMSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDSRM 390
+SS PITG+STYNVTPMKA VYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD RM
Sbjct: 121 KSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRM 180
Query: 389 DGINNLILSYTFFKVADE 336
DGINNLILSYTFFKV++E
Sbjct: 181 DGINNLILSYTFFKVSEE 198
>ref|XP_002889401.1| cytochrome c oxidase assembly protein CtaG [Arabidopsis lyrata subsp.
lyrata] gi|297335243|gb|EFH65660.1| cytochrome c oxidase
assembly protein CtaG [Arabidopsis lyrata subsp. lyrata]
Length = 287
Score = 208 bits (530), Expect(2) = 1e-90
Identities = 107/146 (73%), Positives = 119/146 (81%)
Frame = -1
Query: 1057 SVSLNSCNTMSQLRIQSSCSFPGSRRQYGTHAATERKSQKMLIYLTGLVFAMVGLTYAAV 878
S SLNS + ++ + S+ RQY T + TE KSQKML YLT +VF MVGLTYAAV
Sbjct: 59 SWSLNSHSATAKSMLVSA------HRQYSTQSPTETKSQKMLYYLTAVVFGMVGLTYAAV 112
Query: 877 PLYRRFCQATGYGGTVQRRESVEEKIARHAQEGTVTNREIVVQFNADVADGMPWKFVPTQ 698
PLYR FCQATGYGGTVQR+E+VEEKIARH++ GTVT REIVVQFNADVADGM WKF PTQ
Sbjct: 113 PLYRTFCQATGYGGTVQRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQ 172
Query: 697 REVRVKPGESALAFYTAENRSSTPIT 620
REVRVKPGESALAFYTAEN+SS PIT
Sbjct: 173 REVRVKPGESALAFYTAENKSSAPIT 198
Score = 153 bits (386), Expect(2) = 1e-90
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = -3
Query: 569 RSSTPITGMSTYNVTPMKAAVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDSRM 390
+SS PITG+STYNVTPMKA VYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETD RM
Sbjct: 192 KSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRM 251
Query: 389 DGINNLILSYTFFKVADE 336
DGINNLILSYTFFKV++E
Sbjct: 252 DGINNLILSYTFFKVSEE 269