BLASTX nr result

ID: Bupleurum21_contig00025139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025139
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_004142765.1| PREDICTED: protein FIZZY-RELATED 3-like [Cuc...   126   2e-27
ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vi...   125   5e-27
emb|CAN74903.1| hypothetical protein VITISV_042043 [Vitis vinifera]   124   1e-26

>ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|222851924|gb|EEE89471.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  138 bits (347), Expect = 5e-31
 Identities = 78/129 (60%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
 Frame = +3

Query: 141 MDTNQRRKSGINLPPTMSESSLRLQNLTNPSTPVRNVSSFLASPRTMSPRTISNLSSPVK 320
           MD+  RRKSG+NLP  M+E+SLRL+  ++ S       SF A     SPR IS+LSSP K
Sbjct: 1   MDSTPRRKSGLNLPSGMNETSLRLETFSSSS-------SFRAVTCVSSPRAISSLSSPSK 53

Query: 321 AGTCSDRFIPCRSSSRLHTFGLMDKGS--QEGGNEAYTRLLRCELFGSDFGSSSPFAGNN 494
             +CSDRFIPCRSSSRLHTFGL++KGS  +EGGNEAY RLL+ ELFGSDFGS S  AG  
Sbjct: 54  TSSCSDRFIPCRSSSRLHTFGLVEKGSPVKEGGNEAYARLLKSELFGSDFGSFSSPAG-- 111

Query: 495 VRGSGGAGS 521
             G GG  S
Sbjct: 112 --GQGGLSS 118


>ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|222864257|gb|EEF01388.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score =  137 bits (345), Expect = 9e-31
 Identities = 78/129 (60%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
 Frame = +3

Query: 141 MDTNQRRKSGINLPPTMSESSLRLQNLTNPSTPVRNVSSFLASPRTMSPRTISNLSSPVK 320
           MD+  RRKSG+NLP  M+E+SLRL+  ++ S       SF A     SPR IS+LSSP K
Sbjct: 1   MDSTPRRKSGLNLPSGMNETSLRLETFSSSS-------SFRAVTCVSSPRAISSLSSPSK 53

Query: 321 AGTCSDRFIPCRSSSRLHTFGLMDKGS--QEGGNEAYTRLLRCELFGSDFGSSSPFAGNN 494
             +CSDRFIPCRSSSRL TFGL++KGS  +EGGNEAY RLL+ ELFGSDFGS S  AG  
Sbjct: 54  TSSCSDRFIPCRSSSRLQTFGLIEKGSPVKEGGNEAYARLLKSELFGSDFGSFSSPAG-- 111

Query: 495 VRGSGGAGS 521
             G GG GS
Sbjct: 112 --GQGGLGS 118


>ref|XP_004142765.1| PREDICTED: protein FIZZY-RELATED 3-like [Cucumis sativus]
           gi|449483830|ref|XP_004156705.1| PREDICTED: protein
           FIZZY-RELATED 3-like [Cucumis sativus]
          Length = 475

 Score =  126 bits (316), Expect = 2e-27
 Identities = 72/124 (58%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
 Frame = +3

Query: 141 MDTNQRRKSGINLPPTMSESSLRLQNLTNPSTPVRNVSSFLASPRTMSPRTISNLSSPVK 320
           MD+ Q RK+G+NLP  M+E SLRL+  +                   S R ISNLSSP K
Sbjct: 1   MDSPQARKAGLNLPAGMAERSLRLETFSG------------------SFRAISNLSSPSK 42

Query: 321 AGTCSDRFIPCRSSSRLHTFGLMDKGS--QEGGNEAYTRLLRCELFGSDFGSSSPFAGNN 494
             TCSDRFIPCRSSSRLHTFGL++K S  +EGGNEAY+RLL+ ELFGSDFGS SP AG+ 
Sbjct: 43  TSTCSDRFIPCRSSSRLHTFGLIEKASPVKEGGNEAYSRLLKTELFGSDFGSFSP-AGSQ 101

Query: 495 VRGS 506
            +GS
Sbjct: 102 GQGS 105


>ref|XP_002283264.1| PREDICTED: protein FIZZY-RELATED 3 [Vitis vinifera]
           gi|296086214|emb|CBI31655.3| unnamed protein product
           [Vitis vinifera]
          Length = 471

 Score =  125 bits (313), Expect = 5e-27
 Identities = 70/119 (58%), Positives = 83/119 (69%), Gaps = 2/119 (1%)
 Frame = +3

Query: 141 MDTNQRRKSGINLPPTMSESSLRLQNLTNPSTPVRNVSSFLASPRTMSPRTISNLSSPVK 320
           MD+++RRKSG+NLP  MSE+SLRL+  +                   S R ISNLSSP K
Sbjct: 1   MDSSERRKSGLNLPAGMSETSLRLETFSG------------------SYRAISNLSSPSK 42

Query: 321 AGTCSDRFIPCRSSSRLHTFGLMDKGS--QEGGNEAYTRLLRCELFGSDFGSSSPFAGN 491
           A +CSDRFIPCRSSSRLHTFGL++K S  +EGGNEAY RLL+ ELFGSDFGSS    G+
Sbjct: 43  ATSCSDRFIPCRSSSRLHTFGLIEKASPVKEGGNEAYFRLLKQELFGSDFGSSPAGQGS 101


>emb|CAN74903.1| hypothetical protein VITISV_042043 [Vitis vinifera]
          Length = 456

 Score =  124 bits (310), Expect = 1e-26
 Identities = 69/115 (60%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +3

Query: 141 MDTNQRRKSGINLPPTMSESSLRLQNLTNPSTPVRNVSSFLASPRTMSPRTISNLSSPVK 320
           MD+++RRKSG+NLP  MSE+SLRL+  +                   S R ISNLSSP K
Sbjct: 1   MDSSERRKSGLNLPAGMSETSLRLETFSG------------------SYRAISNLSSPSK 42

Query: 321 AGTCSDRFIPCRSSSRLHTFGLMDKGS--QEGGNEAYTRLLRCELFGSDFGSSSP 479
           A +CSDRFIPCRSSSRLHTFGL++K S  +E  NEAY RLL+ ELFGSDFGSSSP
Sbjct: 43  ATSCSDRFIPCRSSSRLHTFGLIEKASPVKESXNEAYFRLLKQELFGSDFGSSSP 97


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