BLASTX nr result

ID: Bupleurum21_contig00025112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025112
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336431.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-08
gb|AAZ79231.1| cellulose synthase-like protein CslG [Nicotiana t...    62   5e-08
ref|XP_004165318.1| PREDICTED: cellulose synthase-like protein G...    61   8e-08
ref|XP_004149010.1| PREDICTED: cellulose synthase-like protein G...    61   8e-08
ref|XP_004172486.1| PREDICTED: cellulose synthase-like protein G...    53   2e-07

>ref|XP_002336431.1| predicted protein [Populus trichocarpa] gi|222834997|gb|EEE73446.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score = 58.5 bits (140), Expect(2) = 3e-08
 Identities = 36/81 (44%), Positives = 46/81 (56%)
 Frame = -1

Query: 263 SAFCHPDQPAFLIRRCTN*LPS*MP*TKPRGGLSGFWVVFSKYNHLTFGVSSMGFFMGYS 84
           SAFC+PD+PAF      N L   +   K R  +    V FSKY+  T+GV +MG  MG +
Sbjct: 265 SAFCNPDRPAFF-GDVPNSLIGALDQQK-RWSVGLLEVGFSKYSPATYGVRTMGPSMGLA 322

Query: 83  YAHIAFWPFLSIPVHHICFPP 21
           YA +AFWP  SIP+    F P
Sbjct: 323 YAQVAFWPLWSIPITAYAFLP 343



 Score = 24.3 bits (51), Expect(2) = 3e-08
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -2

Query: 40  TIYAFLPQLALI 5
           T YAFLPQLAL+
Sbjct: 337 TAYAFLPQLALL 348


>gb|AAZ79231.1| cellulose synthase-like protein CslG [Nicotiana tabacum]
          Length = 744

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
 Frame = -1

Query: 263 SAFCHPDQPAFL--IRRCTN*LPS*MP*TKPRGGLSGFWVVFSKYNHLTFGVSSMGFFMG 90
           S FC+P +PAFL  +    + + S       R  +    V FSKY+ LTFGV SMGF M 
Sbjct: 469 SVFCNPKRPAFLGDVPISLHDVIS----QNKRWSVGLLEVAFSKYSPLTFGVRSMGFVMA 524

Query: 89  YSYAHIAFWPFLSIPVHHICFPP 21
           + YAH AFWP  S+P+    F P
Sbjct: 525 HCYAHYAFWPIWSLPIAIYAFIP 547


>ref|XP_004165318.1| PREDICTED: cellulose synthase-like protein G3-like [Cucumis
           sativus]
          Length = 740

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/44 (63%), Positives = 31/44 (70%)
 Frame = -1

Query: 152 VVFSKYNHLTFGVSSMGFFMGYSYAHIAFWPFLSIPVHHICFPP 21
           V FSKYN +T+GV S+G  MG SYAH AFWPF SIPV    F P
Sbjct: 502 VTFSKYNPITYGVRSIGLLMGLSYAHYAFWPFCSIPVILYAFLP 545


>ref|XP_004149010.1| PREDICTED: cellulose synthase-like protein G3-like [Cucumis
           sativus]
          Length = 740

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/44 (63%), Positives = 31/44 (70%)
 Frame = -1

Query: 152 VVFSKYNHLTFGVSSMGFFMGYSYAHIAFWPFLSIPVHHICFPP 21
           V FSKYN +T+GV S+G  MG SYAH AFWPF SIPV    F P
Sbjct: 502 VTFSKYNPITYGVRSIGLLMGLSYAHYAFWPFCSIPVILYAFLP 545


>ref|XP_004172486.1| PREDICTED: cellulose synthase-like protein G3-like [Cucumis
           sativus]
          Length = 739

 Score = 53.1 bits (126), Expect(2) = 2e-07
 Identities = 34/81 (41%), Positives = 39/81 (48%)
 Frame = -1

Query: 263 SAFCHPDQPAFLIRRCTN*LPS*MP*TKPRGGLSGFWVVFSKYNHLTFGVSSMGFFMGYS 84
           S FC+P + AF      N L         R  +  F V FSKYN +T+GV SMG  MG  
Sbjct: 466 SVFCNPKRVAFYGDVPINLLDGLNQ--IKRWSIGFFEVAFSKYNPITYGVRSMGLLMGLC 523

Query: 83  YAHIAFWPFLSIPVHHICFPP 21
           Y H AFW    IPV    F P
Sbjct: 524 YTHYAFWLAWCIPVTVYAFLP 544



 Score = 26.6 bits (57), Expect(2) = 2e-07
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -2

Query: 40  TIYAFLPQLALI 5
           T+YAFLPQLALI
Sbjct: 538 TVYAFLPQLALI 549


Top