BLASTX nr result

ID: Bupleurum21_contig00025111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025111
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71184.1| hypothetical protein VITISV_033417 [Vitis vinifera]   340   3e-91
gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]     280   3e-73
dbj|BAA97174.1| unnamed protein product [Arabidopsis thaliana]        280   3e-73
ref|NP_199551.2| uncharacterized protein [Arabidopsis thaliana] ...   280   3e-73
ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp....   277   2e-72

>emb|CAN71184.1| hypothetical protein VITISV_033417 [Vitis vinifera]
          Length = 862

 Score =  340 bits (871), Expect = 3e-91
 Identities = 172/270 (63%), Positives = 205/270 (75%), Gaps = 4/270 (1%)
 Frame = -1

Query: 800  IPVFAHSKRGTEQKTECSLYVKLLYAYLREYVSVADLSSHQPYRSSLLHYSAGYDSSKLE 621
            IP F  +KRG+EQKTEC+LY++LLYAYLR +V + DL++HQPYRSSLLHYS  YD S L 
Sbjct: 214  IPGFVSAKRGSEQKTECNLYMRLLYAYLRAFVPIYDLTAHQPYRSSLLHYSTIYDGSALL 273

Query: 620  HAEFLVYTLINFWLVDTDFSPLPVNVCKSFGANFSLRTVLGECPPTAGLGEIVNVFVKYL 441
             AEFLVYTL++FW+VD DFSPL VNV KSF  +F  R+VLGE PPT+GLGE+V +FVKYL
Sbjct: 274  QAEFLVYTLMHFWMVDNDFSPLSVNVGKSFRVSFPFRSVLGETPPTSGLGEVVKLFVKYL 333

Query: 440  NLISIHRSEGSDKVALAESPRWMV-GPVDVVKSGDAGIYS--VGSWNSMIQRPLYRFILR 270
            NL +   + GSD V    SPRW V GPVDVVK+ +    S  + SWNS+IQRP+YRFILR
Sbjct: 334  NLSAGAXTGGSDLVEYGGSPRWKVSGPVDVVKTREVTGVSTCLVSWNSLIQRPVYRFILR 393

Query: 269  TFIFCPMETSIKNASQVFSLWINYIEPWTISFKDFSGLDESAGMPTTDSKNE-SQLPLCG 93
            TF+F PM  S+KN SQV S+W++Y+EPW IS  DFS LD     P   S  E SQ   CG
Sbjct: 394  TFLFSPMGVSMKNVSQVLSVWVSYMEPWMISLDDFSELDAIGDKPAKISTKEVSQSQACG 453

Query: 92   YSSSWQGFVLINYLFYSSLVMHFLGFAHKF 3
            YSSSWQG+VL NYLFY+SLVMHF+GFAHKF
Sbjct: 454  YSSSWQGYVLSNYLFYNSLVMHFIGFAHKF 483


>gb|ABD64961.1| hypothetical protein 25.t00068 [Brassica oleracea]
          Length = 1161

 Score =  280 bits (715), Expect = 3e-73
 Identities = 136/264 (51%), Positives = 179/264 (67%), Gaps = 4/264 (1%)
 Frame = -1

Query: 782  SKRGTEQKTECSLYVKLLYAYLREYVSVADLSSHQPYRSSLLHYSAGYDSSKLEHAEFLV 603
            SKR ++QK EC+LYVK+LY+YL+ +V V DL++HQPYRSSLL Y  GYD S +  AEFLV
Sbjct: 222  SKRDSDQKLECNLYVKILYSYLKAFVPVFDLNAHQPYRSSLLQYGNGYDGSVMARAEFLV 281

Query: 602  YTLINFWLVDTDFSPLPVNVCKSFGANFSLRTVLGECPPTAGLGEIVNVFVKYLNLISIH 423
               +++W+V+ DFSP PV   KSFG     R+ + E PPT GL E+V + VKYLNL  + 
Sbjct: 282  NLFVHYWIVENDFSPFPVITAKSFGVAPPFRSAVEEIPPTCGLQEVVKLLVKYLNLSWVT 341

Query: 422  RSEGSDK-VALAESPRWMVGPV-DVVKSGDAGIYSVGSWNSMIQRPLYRFILRTFIFCPM 249
               GS+  +   ESPRW            +  +  + SWN+ +QRPLYR+ILR+F+FCP+
Sbjct: 342  SGVGSENYIEYGESPRWKTPTSGSSFHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCPI 401

Query: 248  ETSIKNASQVFSLWINYIEPWTISFKDFSGLDESAGMPTTDSKNESQLPL--CGYSSSWQ 75
             +SIKNASQVFS+W+ Y+EPW IS  DFS L+ +      D+K E       CGY+S WQ
Sbjct: 402  GSSIKNASQVFSIWVTYLEPWMISLDDFSDLEAALNGSVKDAKKEESYESRGCGYTSLWQ 461

Query: 74   GFVLINYLFYSSLVMHFLGFAHKF 3
             +V+ NYL+YSSLVMHF+GFAHKF
Sbjct: 462  SYVISNYLYYSSLVMHFIGFAHKF 485


>dbj|BAA97174.1| unnamed protein product [Arabidopsis thaliana]
          Length = 665

 Score =  280 bits (715), Expect = 3e-73
 Identities = 136/265 (51%), Positives = 181/265 (68%), Gaps = 5/265 (1%)
 Frame = -1

Query: 782  SKRGTEQKTECSLYVKLLYAYLREYVSVADLSSHQPYRSSLLHYSAGYDSSKLEHAEFLV 603
            +KR ++QK EC+LY++LLY+YL+ +V V DL++HQPYRSSLLHY  GYD S +  AEFLV
Sbjct: 294  NKRDSDQKLECNLYIRLLYSYLKAFVPVFDLNAHQPYRSSLLHYGNGYDGSVMTRAEFLV 353

Query: 602  YTLINFWLVDTDFSPLPVNVCKSFGANFSLRTVLGECPPTAGLGEIVNVFVKYLNLISIH 423
               +++WLV+ DFSP PV   KSFG     R+ + E PPT GL E+V + VKYLNL  + 
Sbjct: 354  NVFVHYWLVENDFSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVT 413

Query: 422  RSEGSDK-VALAESPRWMVGPVDVVKS--GDAGIYSVGSWNSMIQRPLYRFILRTFIFCP 252
               GS+  +   ESPRW   P     S   +  +  + SWN+ +QRPLYR+ILR+F+FCP
Sbjct: 414  SGVGSENYIEYGESPRWKT-PTSGSSSHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCP 472

Query: 251  METSIKNASQVFSLWINYIEPWTISFKDFSGLDESAGMPTTDSKNES--QLPLCGYSSSW 78
            + +SIKNASQVFS+W+ Y+EPW IS  DFS  + +      D K E   +  +CGY+  W
Sbjct: 473  IGSSIKNASQVFSIWVTYLEPWMISLDDFSVFEPALSGSVKDMKKEDSYESRVCGYTPLW 532

Query: 77   QGFVLINYLFYSSLVMHFLGFAHKF 3
            Q +V+ NYL+YSSLVMHF+GFAHKF
Sbjct: 533  QSYVISNYLYYSSLVMHFIGFAHKF 557


>ref|NP_199551.2| uncharacterized protein [Arabidopsis thaliana]
            gi|332008123|gb|AED95506.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 862

 Score =  280 bits (715), Expect = 3e-73
 Identities = 136/265 (51%), Positives = 181/265 (68%), Gaps = 5/265 (1%)
 Frame = -1

Query: 782  SKRGTEQKTECSLYVKLLYAYLREYVSVADLSSHQPYRSSLLHYSAGYDSSKLEHAEFLV 603
            +KR ++QK EC+LY++LLY+YL+ +V V DL++HQPYRSSLLHY  GYD S +  AEFLV
Sbjct: 294  NKRDSDQKLECNLYIRLLYSYLKAFVPVFDLNAHQPYRSSLLHYGNGYDGSVMTRAEFLV 353

Query: 602  YTLINFWLVDTDFSPLPVNVCKSFGANFSLRTVLGECPPTAGLGEIVNVFVKYLNLISIH 423
               +++WLV+ DFSP PV   KSFG     R+ + E PPT GL E+V + VKYLNL  + 
Sbjct: 354  NVFVHYWLVENDFSPFPVVTAKSFGVAPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVT 413

Query: 422  RSEGSDK-VALAESPRWMVGPVDVVKS--GDAGIYSVGSWNSMIQRPLYRFILRTFIFCP 252
               GS+  +   ESPRW   P     S   +  +  + SWN+ +QRPLYR+ILR+F+FCP
Sbjct: 414  SGVGSENYIEYGESPRWKT-PTSGSSSHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCP 472

Query: 251  METSIKNASQVFSLWINYIEPWTISFKDFSGLDESAGMPTTDSKNES--QLPLCGYSSSW 78
            + +SIKNASQVFS+W+ Y+EPW IS  DFS  + +      D K E   +  +CGY+  W
Sbjct: 473  IGSSIKNASQVFSIWVTYLEPWMISLDDFSVFEPALSGSVKDMKKEDSYESRVCGYTPLW 532

Query: 77   QGFVLINYLFYSSLVMHFLGFAHKF 3
            Q +V+ NYL+YSSLVMHF+GFAHKF
Sbjct: 533  QSYVISNYLYYSSLVMHFIGFAHKF 557


>ref|XP_002865121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297310956|gb|EFH41380.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1054

 Score =  277 bits (709), Expect = 2e-72
 Identities = 134/264 (50%), Positives = 181/264 (68%), Gaps = 4/264 (1%)
 Frame = -1

Query: 782  SKRGTEQKTECSLYVKLLYAYLREYVSVADLSSHQPYRSSLLHYSAGYDSSKLEHAEFLV 603
            +KR ++QK EC+LY++LLY+YL+ +V V DL++HQPYRSSLLHY  GYD S +  AEFLV
Sbjct: 225  NKRDSDQKLECNLYLRLLYSYLKAFVPVFDLNAHQPYRSSLLHYGNGYDGSVMTRAEFLV 284

Query: 602  YTLINFWLVDTDFSPLPVNVCKSFGANFSLRTVLGECPPTAGLGEIVNVFVKYLNLISIH 423
               +++WLV+ DFSP PV   KS G +   R+ + E PPT GL E+V + VKYLNL  + 
Sbjct: 285  NVFVHYWLVENDFSPFPVVTAKSVGVSPPFRSAVEEIPPTCGLEEVVKLLVKYLNLSWVT 344

Query: 422  RSEGSDK-VALAESPRWMVGPV-DVVKSGDAGIYSVGSWNSMIQRPLYRFILRTFIFCPM 249
               GS+  +   ESPRW            +  +  + SWN+ +QRPLYR+ILR+F+FCP+
Sbjct: 345  SGVGSESYIEYGESPRWKTPTSGSSFHVANLSLRPLTSWNTHLQRPLYRYILRSFLFCPI 404

Query: 248  ETSIKNASQVFSLWINYIEPWTISFKDFSGLDESAGMPTTDSKNES--QLPLCGYSSSWQ 75
             +SIKNASQVF++W+ Y+EPW IS  DFS L+ +      D K E   +  +CGY+S WQ
Sbjct: 405  GSSIKNASQVFTIWVVYLEPWMISLDDFSDLEAALNGSVKDVKKEESYESRVCGYTSLWQ 464

Query: 74   GFVLINYLFYSSLVMHFLGFAHKF 3
             +V+ NYL+YSSLVMHF+GFAHKF
Sbjct: 465  SYVISNYLYYSSLVMHFIGFAHKF 488


Top