BLASTX nr result

ID: Bupleurum21_contig00025109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025109
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29903.3| unnamed protein product [Vitis vinifera]              146   2e-33
ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245...   146   2e-33
ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|1...   140   2e-31
ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|2...   138   7e-31
ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|26...   134   8e-30

>emb|CBI29903.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  146 bits (369), Expect = 2e-33
 Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
 Frame = -3

Query: 566 RRRARLREVEGLQLMSPLPQGQS----PSVPLFDAPVPLEHDHSLISPSPTVGIRRCPPT 399
           RRRARLRE++G Q+  P+PQ  S    P +P   A   LE D S+ISPSPT G++  P  
Sbjct: 119 RRRARLREIDGQQIDIPIPQDISDVHDPILPPSSAQ--LEQDISMISPSPTSGMKLVPKA 176

Query: 398 VGKVPKILLDITNQNAGQPDFLTPEKKLLNSIDKVDKVVMNELHRLKRTPTAKKVEREKK 219
           VGKVPKILLDIT+Q  G  DFLTP+KKLLNSID V+K VM+EL +LKRTP+AK+ E+EK+
Sbjct: 177 VGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMDELGKLKRTPSAKRAEQEKR 236

Query: 218 VRTLMSMR 195
           VRTLMSMR
Sbjct: 237 VRTLMSMR 244


>ref|XP_002277253.1| PREDICTED: uncharacterized protein LOC100245175 [Vitis vinifera]
          Length = 266

 Score =  146 bits (369), Expect = 2e-33
 Identities = 80/128 (62%), Positives = 97/128 (75%), Gaps = 4/128 (3%)
 Frame = -3

Query: 566 RRRARLREVEGLQLMSPLPQGQS----PSVPLFDAPVPLEHDHSLISPSPTVGIRRCPPT 399
           RRRARLRE++G Q+  P+PQ  S    P +P   A   LE D S+ISPSPT G++  P  
Sbjct: 141 RRRARLREIDGQQIDIPIPQDISDVHDPILPPSSAQ--LEQDISMISPSPTSGMKLVPKA 198

Query: 398 VGKVPKILLDITNQNAGQPDFLTPEKKLLNSIDKVDKVVMNELHRLKRTPTAKKVEREKK 219
           VGKVPKILLDIT+Q  G  DFLTP+KKLLNSID V+K VM+EL +LKRTP+AK+ E+EK+
Sbjct: 199 VGKVPKILLDITDQTGGGSDFLTPQKKLLNSIDTVEKAVMDELGKLKRTPSAKRAEQEKR 258

Query: 218 VRTLMSMR 195
           VRTLMSMR
Sbjct: 259 VRTLMSMR 266


>ref|XP_002330993.1| predicted protein [Populus trichocarpa] gi|118483996|gb|ABK93885.1|
           unknown [Populus trichocarpa]
           gi|222872923|gb|EEF10054.1| predicted protein [Populus
           trichocarpa]
          Length = 248

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/125 (57%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
 Frame = -3

Query: 566 RRRARLREVEGLQLMSPLPQGQSPSVPLFDAPVP-LEHDHSLISPSPTVGIRRCPPTVGK 390
           RRR RL   +GL++ SP+PQ +         PV  LEH + ++SP PT  ++ C  T+GK
Sbjct: 124 RRRERLGGSDGLEIRSPMPQVRMNHDSSEATPVAHLEHSNRIMSPKPTTAVKGCSSTIGK 183

Query: 389 VPKILLDITNQNAGQPDFLTPEKKLLNSIDKVDKVVMNELHRLKRTPTAKKVEREKKVRT 210
           VPKIL  ITNQ +G PD LTP+KKLLNSID V+KVVM EL ++KRTP+A+K EREK+VRT
Sbjct: 184 VPKILQHITNQASGDPDSLTPQKKLLNSIDTVEKVVMEELRKMKRTPSARKAEREKRVRT 243

Query: 209 LMSMR 195
           LMSMR
Sbjct: 244 LMSMR 248


>ref|XP_002323297.1| predicted protein [Populus trichocarpa] gi|222867927|gb|EEF05058.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  138 bits (347), Expect = 7e-31
 Identities = 72/126 (57%), Positives = 90/126 (71%), Gaps = 3/126 (2%)
 Frame = -3

Query: 563 RRARLREVEGLQLMSPLPQGQSPSVPLFDAPVPLEH---DHSLISPSPTVGIRRCPPTVG 393
           RR RL   +G ++ SP+PQG+    P F    P+ H    + ++SP PT   + CP T+G
Sbjct: 124 RRGRLGGSDGREIGSPMPQGRMD--PEFSEATPVAHPEPSNRIMSPKPTPAFKGCPSTIG 181

Query: 392 KVPKILLDITNQNAGQPDFLTPEKKLLNSIDKVDKVVMNELHRLKRTPTAKKVEREKKVR 213
           KVPKIL  ITNQ +G P+ LTP+KKLLNSID V+KVVM EL +LKRTP+AKK EREK+VR
Sbjct: 182 KVPKILQHITNQASGDPECLTPQKKLLNSIDTVEKVVMEELQKLKRTPSAKKAEREKRVR 241

Query: 212 TLMSMR 195
           TLMSMR
Sbjct: 242 TLMSMR 247


>ref|NP_181755.1| uv-b-insensitive 4 [Arabidopsis thaliana] gi|2673916|gb|AAB88650.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|28950705|gb|AAO63276.1| At2g42260 [Arabidopsis
           thaliana] gi|110735686|dbj|BAE99823.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330255003|gb|AEC10097.1| uv-b-insensitive 4
           [Arabidopsis thaliana]
          Length = 259

 Score =  134 bits (338), Expect = 8e-30
 Identities = 71/130 (54%), Positives = 95/130 (73%), Gaps = 6/130 (4%)
 Frame = -3

Query: 566 RRRARLREVEGLQLMSPLPQGQSPSVPLFDAPVPL-----EHDHSLISPSPTVGIRR-CP 405
           RRRAR+ E  G  + +P PQ     + + D+ VPL     EHD+S+++P P++G +R  P
Sbjct: 134 RRRARMGEGVGRDIETPTPQ----QLGVLDSLVPLSGAHLEHDYSMVTPGPSIGFKRPWP 189

Query: 404 PTVGKVPKILLDITNQNAGQPDFLTPEKKLLNSIDKVDKVVMNELHRLKRTPTAKKVERE 225
           P+  KV +ILLDIT +N G+ D LTPEKKLLNSIDKV+KVVM E+ ++K TP+AK+ ERE
Sbjct: 190 PSTAKVHQILLDITRENTGEEDALTPEKKLLNSIDKVEKVVMEEIQKMKSTPSAKRAERE 249

Query: 224 KKVRTLMSMR 195
           K+VRTLMSMR
Sbjct: 250 KRVRTLMSMR 259


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