BLASTX nr result

ID: Bupleurum21_contig00025104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025104
         (765 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002872092.1| hypothetical protein ARALYDRAFT_910430 [Arab...    60   5e-07
ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Popu...    60   5e-07
ref|XP_004149456.1| PREDICTED: arabinogalactan peptide 16-like [...    60   7e-07
ref|XP_003530347.1| PREDICTED: arabinogalactan peptide 16-like [...    60   7e-07
ref|NP_974828.1| arabinogalactan protein 41 [Arabidopsis thalian...    60   7e-07

>ref|XP_002872092.1| hypothetical protein ARALYDRAFT_910430 [Arabidopsis lyrata subsp.
           lyrata] gi|297317929|gb|EFH48351.1| hypothetical protein
           ARALYDRAFT_910430 [Arabidopsis lyrata subsp. lyrata]
          Length = 63

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 370 MDDAPSPSPVALPTSDGTTVDQGIAYVLMLLALIVTYIIH 489
           M  A S +P   PTSDGTT+DQGIAYVLML+AL++TY+IH
Sbjct: 24  MAQAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63


>ref|XP_002320846.1| hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa]
           gi|118483747|gb|ABK93766.1| unknown [Populus
           trichocarpa] gi|222861619|gb|EEE99161.1| hypothetical
           protein POPTRDRAFT_572354 [Populus trichocarpa]
          Length = 76

 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +1

Query: 376 DAPSPSPVALPTSDGTTVDQGIAYVLMLLALIVTYIIH 489
           +A SP+P   PTSDGT++DQGIAY+LML+AL++TY+IH
Sbjct: 29  EAQSPAPAPAPTSDGTSIDQGIAYLLMLVALVLTYLIH 66


>ref|XP_004149456.1| PREDICTED: arabinogalactan peptide 16-like [Cucumis sativus]
           gi|449530806|ref|XP_004172383.1| PREDICTED:
           arabinogalactan peptide 16-like [Cucumis sativus]
          Length = 70

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 385 SPSPVALPTSDGTTVDQGIAYVLMLLALIVTYIIH 489
           SP+P   PTSDGT +DQGIAYVLML+AL++TYIIH
Sbjct: 36  SPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH 70


>ref|XP_003530347.1| PREDICTED: arabinogalactan peptide 16-like [Glycine max]
          Length = 71

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 379 APSPSPVALPTSDGTTVDQGIAYVLMLLALIVTYIIH 489
           A S SP   PTSDGT++DQGIAYVLMLLAL++TYIIH
Sbjct: 33  AQSASPAPAPTSDGTSLDQGIAYVLMLLALVLTYIIH 69


>ref|NP_974828.1| arabinogalactan protein 41 [Arabidopsis thaliana]
           gi|21593798|gb|AAM65765.1| unknown [Arabidopsis
           thaliana] gi|62318556|dbj|BAD94927.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|62319355|dbj|BAD94646.1| hypothetical protein
           [Arabidopsis thaliana] gi|105829394|gb|ABF74692.1|
           At5g24105 [Arabidopsis thaliana]
           gi|332005874|gb|AED93257.1| arabinogalactan protein 41
           [Arabidopsis thaliana]
          Length = 63

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 370 MDDAPSPSPVALPTSDGTTVDQGIAYVLMLLALIVTYIIH 489
           M  A S +P   PTSDGTT+DQGIAYVLML+AL++TY+IH
Sbjct: 24  MAHAQSAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYLIH 63


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