BLASTX nr result

ID: Bupleurum21_contig00025096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025096
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19395.3| unnamed protein product [Vitis vinifera]              293   2e-77
ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vi...   293   2e-77
emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]   288   5e-76
ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cuc...   275   5e-72
ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Gly...   257   2e-66

>emb|CBI19395.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  293 bits (751), Expect = 2e-77
 Identities = 149/236 (63%), Positives = 170/236 (72%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 VEDVVG----SPGSPGDQFMSNMYQYFANRTSPGSGGXXXXXXXXXXXXXXXXXXXXEPE 511
           VED++G    SPGS  D+FMS +YQYFANRTSPG  G                     PE
Sbjct: 154 VEDMIGAESGSPGSLPDRFMSEIYQYFANRTSPG--GERASRRQRKREKARQGRRKWMPE 211

Query: 510 HYVKIVNCSPTPTRPLQGLWKGICDDMKLDFYLVAYDDIGGIACRRVEDSSKPFSGYAPV 331
           H+VKIVNCSPTP+RPLQGLWKGI DD  L F+LVAYDDIGGIACR + DSSKP SGY+PV
Sbjct: 212 HFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYSPV 271

Query: 330 FWTSDTTFIESPFSPEEQYIYDSRTHLRPPEASDHIH------RDEAVSRILYINSSYDL 169
           FWTS TTF+E+PFSPEE+Y+YDSR HLRP   +DHIH       +E VS IL INSSYDL
Sbjct: 272 FWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHEHHPLTENEVVSHILCINSSYDL 331

Query: 168 VIPDLAETSVNPRQVEGRIWQYGNGTFGFGFLRDNHIVDLKHITRNDSFLDTT*CC 1
           VIPDLA TS NPR VEGRIW Y +GTFGFGFLR++ IVDLKHI ++   L+    C
Sbjct: 332 VIPDLAGTSANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIAQHGCLLEAMELC 387


>ref|XP_002283336.1| PREDICTED: F-box protein At3g12350 [Vitis vinifera]
          Length = 469

 Score =  293 bits (751), Expect = 2e-77
 Identities = 149/236 (63%), Positives = 170/236 (72%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 VEDVVG----SPGSPGDQFMSNMYQYFANRTSPGSGGXXXXXXXXXXXXXXXXXXXXEPE 511
           VED++G    SPGS  D+FMS +YQYFANRTSPG  G                     PE
Sbjct: 232 VEDMIGAESGSPGSLPDRFMSEIYQYFANRTSPG--GERASRRQRKREKARQGRRKWMPE 289

Query: 510 HYVKIVNCSPTPTRPLQGLWKGICDDMKLDFYLVAYDDIGGIACRRVEDSSKPFSGYAPV 331
           H+VKIVNCSPTP+RPLQGLWKGI DD  L F+LVAYDDIGGIACR + DSSKP SGY+PV
Sbjct: 290 HFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYSPV 349

Query: 330 FWTSDTTFIESPFSPEEQYIYDSRTHLRPPEASDHIH------RDEAVSRILYINSSYDL 169
           FWTS TTF+E+PFSPEE+Y+YDSR HLRP   +DHIH       +E VS IL INSSYDL
Sbjct: 350 FWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHEHHPLTENEVVSHILCINSSYDL 409

Query: 168 VIPDLAETSVNPRQVEGRIWQYGNGTFGFGFLRDNHIVDLKHITRNDSFLDTT*CC 1
           VIPDLA TS NPR VEGRIW Y +GTFGFGFLR++ IVDLKHI ++   L+    C
Sbjct: 410 VIPDLAGTSANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIAQHGCLLEAMELC 465


>emb|CAN72848.1| hypothetical protein VITISV_013938 [Vitis vinifera]
          Length = 469

 Score =  288 bits (738), Expect = 5e-76
 Identities = 147/236 (62%), Positives = 168/236 (71%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 VEDVVG----SPGSPGDQFMSNMYQYFANRTSPGSGGXXXXXXXXXXXXXXXXXXXXEPE 511
           VED++G    SPGS  D+FMS +YQYFANRTSPG  G                     PE
Sbjct: 232 VEDMIGAESGSPGSLPDRFMSEIYQYFANRTSPG--GERASRRQRKREKARQGRRKWMPE 289

Query: 510 HYVKIVNCSPTPTRPLQGLWKGICDDMKLDFYLVAYDDIGGIACRRVEDSSKPFSGYAPV 331
           H+VKIVNCSPTP+RPLQGLWKGI DD  L F+LVAYDDIGGIACR + DSSKP S Y+PV
Sbjct: 290 HFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSXYSPV 349

Query: 330 FWTSDTTFIESPFSPEEQYIYDSRTHLRPPEASDHIH------RDEAVSRILYINSSYDL 169
           FWTS TTF+E+PFSPEE+Y+YDSR HLRP   +DHIH       +E VS IL INSSYDL
Sbjct: 350 FWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHXHHPLTENEVVSHILCINSSYDL 409

Query: 168 VIPDLAETSVNPRQVEGRIWQYGNGTFGFGFLRDNHIVDLKHITRNDSFLDTT*CC 1
           VIPDLA TS NP  VEGRIW Y +GTFGFGFLR++ IVDLKHI ++   L+    C
Sbjct: 410 VIPDLAGTSANPXDVEGRIWLYESGTFGFGFLRNHFIVDLKHIAQHGCLLEAMELC 465


>ref|XP_004142896.1| PREDICTED: F-box protein At3g12350-like [Cucumis sativus]
           gi|449482721|ref|XP_004156384.1| PREDICTED: F-box
           protein At3g12350-like [Cucumis sativus]
          Length = 465

 Score =  275 bits (704), Expect = 5e-72
 Identities = 135/222 (60%), Positives = 164/222 (73%), Gaps = 5/222 (2%)
 Frame = -3

Query: 663 GSPGSPGDQFMSNMYQYFANRTSPGSGGXXXXXXXXXXXXXXXXXXXXEPEHYVKIVNCS 484
           GSPGS  D+ MS +YQ+FANRTSPG  G                    EPEH+VKIVNCS
Sbjct: 244 GSPGSLPDRLMSEIYQHFANRTSPG--GDRASRRQRRRERERLGKRKWEPEHFVKIVNCS 301

Query: 483 PTPTRPLQGLWKGICDDMKLDFYLVAYDDIGGIACRRVEDSSKPFSGYAPVFWTSDTTFI 304
           PTP RPLQGLWKGI +D+ +DFYLV YDDIGGIACR+V DSS+  S YAPVFWTS+TTF+
Sbjct: 302 PTPLRPLQGLWKGISEDLSMDFYLVVYDDIGGIACRKVGDSSERLSSYAPVFWTSNTTFL 361

Query: 303 ESPFSPEEQYIYDSRTHLRPPEASDHIH-----RDEAVSRILYINSSYDLVIPDLAETSV 139
           E+PFS EE+Y++D R H++P  A+D         ++ +SRIL +NSSYDLV+PDLA ++ 
Sbjct: 362 EAPFSVEEEYLHDCRIHVQPLAANDIDELVPSIENKNISRILCVNSSYDLVLPDLAGSAP 421

Query: 138 NPRQVEGRIWQYGNGTFGFGFLRDNHIVDLKHITRNDSFLDT 13
           NPR VEGRIWQY NGTFGFGFLRDN I+DLKH+ RN + +DT
Sbjct: 422 NPRNVEGRIWQYSNGTFGFGFLRDNFIIDLKHLARNGTIVDT 463


>ref|XP_003549378.1| PREDICTED: F-box protein At3g12350-like [Glycine max]
          Length = 444

 Score =  257 bits (656), Expect = 2e-66
 Identities = 131/238 (55%), Positives = 155/238 (65%), Gaps = 19/238 (7%)
 Frame = -3

Query: 669 VVGSPGSPGDQFMSNMYQYFANRTSPGSGGXXXXXXXXXXXXXXXXXXXXEPEHYVKIVN 490
           VV   GSP ++ M+ +YQ+FAN  SPGS                      EP+H+VKIVN
Sbjct: 205 VVVESGSPPEKLMAEIYQHFANPRSPGSD---RSRRQRRREKERLAGRKWEPQHFVKIVN 261

Query: 489 CSPTPTRPLQGLWKGICDDMKLDFYLVAYDDIGGIACRRVEDSSKPFSGYAPVFWTSDTT 310
           CSPTP RPLQGLWKGIC DM L FYLV YDDIGGIACRR+ D    FSG+APVFWTS+ T
Sbjct: 262 CSPTPARPLQGLWKGICGDMSLAFYLVGYDDIGGIACRRIGDPPDRFSGHAPVFWTSNAT 321

Query: 309 FIESPFSPEEQYIYDSRTHLRPPEASDHIHR-------------------DEAVSRILYI 187
           F+ESPFSPEE+ +YDSR HLRP +  + +                     D  V RIL+I
Sbjct: 322 FLESPFSPEEESLYDSRVHLRPLQPGNEVLEQFPFSDSEVVNQIQQFQLSDNVVDRILHI 381

Query: 186 NSSYDLVIPDLAETSVNPRQVEGRIWQYGNGTFGFGFLRDNHIVDLKHITRNDSFLDT 13
           +SSYDLV+PDLA T +NPR  EGRIWQY NGTFGFGFL DN ++D+KHI  N   +DT
Sbjct: 382 SSSYDLVVPDLAGT-LNPRSAEGRIWQYRNGTFGFGFLSDNFVIDMKHIVHNGCIVDT 438


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