BLASTX nr result

ID: Bupleurum21_contig00025088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025088
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243...   192   2e-47
emb|CBI34397.3| unnamed protein product [Vitis vinifera]              192   2e-47
emb|CAA66482.1| transcription factor [Vicia faba var. minor]          186   2e-45
ref|XP_003516710.1| PREDICTED: uncharacterized protein LOC100780...   184   6e-45
ref|XP_003538690.1| PREDICTED: uncharacterized protein LOC100784...   184   8e-45

>ref|XP_002272827.2| PREDICTED: uncharacterized protein LOC100243215 [Vitis vinifera]
          Length = 920

 Score =  192 bits (489), Expect = 2e-47
 Identities = 85/128 (66%), Positives = 109/128 (85%)
 Frame = +2

Query: 2   CLISPQKVNFLLNGTGVDRRSNVFMDNGPQLPTNVTKLLKYGTNLLQAVGEFNGNYVIIV 181
           C+I+P +VNFLLNG GV+RR+NVFMD+GPQ+PTNVT +LKYGTNLLQAVG+FNG+Y++ +
Sbjct: 223 CIITPPQVNFLLNGKGVERRTNVFMDSGPQIPTNVTPMLKYGTNLLQAVGQFNGHYILAI 282

Query: 182 AYMCVVTPPVCPSFQDYVRPAVALPDSDSELIEGASRIALNCPISKKRIKTPVKGHSCNH 361
           A+M V++ P  P  QDYV+PAV++  SD+E++EG SRI+LNCPIS+ RIK PVKGHSC H
Sbjct: 283 AFMAVISSPDNPVLQDYVQPAVSMLHSDNEIVEGPSRISLNCPISRTRIKVPVKGHSCKH 342

Query: 362 YQCFDLDN 385
            QCFD  N
Sbjct: 343 LQCFDFGN 350


>emb|CBI34397.3| unnamed protein product [Vitis vinifera]
          Length = 646

 Score =  192 bits (489), Expect = 2e-47
 Identities = 85/128 (66%), Positives = 109/128 (85%)
 Frame = +2

Query: 2   CLISPQKVNFLLNGTGVDRRSNVFMDNGPQLPTNVTKLLKYGTNLLQAVGEFNGNYVIIV 181
           C+I+P +VNFLLNG GV+RR+NVFMD+GPQ+PTNVT +LKYGTNLLQAVG+FNG+Y++ +
Sbjct: 223 CIITPPQVNFLLNGKGVERRTNVFMDSGPQIPTNVTPMLKYGTNLLQAVGQFNGHYILAI 282

Query: 182 AYMCVVTPPVCPSFQDYVRPAVALPDSDSELIEGASRIALNCPISKKRIKTPVKGHSCNH 361
           A+M V++ P  P  QDYV+PAV++  SD+E++EG SRI+LNCPIS+ RIK PVKGHSC H
Sbjct: 283 AFMAVISSPDNPVLQDYVQPAVSMLHSDNEIVEGPSRISLNCPISRTRIKVPVKGHSCKH 342

Query: 362 YQCFDLDN 385
            QCFD  N
Sbjct: 343 LQCFDFGN 350


>emb|CAA66482.1| transcription factor [Vicia faba var. minor]
          Length = 828

 Score =  186 bits (471), Expect = 2e-45
 Identities = 89/129 (68%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
 Frame = +2

Query: 2   CLISPQKVNFLLNGTGVDRRSNVFMDNGPQLPTNVTKLLKYGTNLLQAVGEFNGNYVIIV 181
           CLISPQ+VNFLLNG G+D R+N  MD GPQ+PTNVT +LK+GTNLLQAVG+FNG+Y+I+V
Sbjct: 215 CLISPQEVNFLLNGKGIDTRTNFRMDPGPQMPTNVTSVLKFGTNLLQAVGQFNGHYIILV 274

Query: 182 AYMCVVTPPVCPSF-QDYVRPAVALPDSDSELIEGASRIALNCPISKKRIKTPVKGHSCN 358
           AYM V + P  P    DYV+PAV   DSDS++IEGASR +LNCPIS  RIKTPVKG SC 
Sbjct: 275 AYMSVASLPEHPVLPPDYVQPAVTSVDSDSDIIEGASRFSLNCPISFTRIKTPVKGRSCK 334

Query: 359 HYQCFDLDN 385
           H+QCFD DN
Sbjct: 335 HFQCFDFDN 343


>ref|XP_003516710.1| PREDICTED: uncharacterized protein LOC100780539 [Glycine max]
          Length = 914

 Score =  184 bits (467), Expect = 6e-45
 Identities = 88/128 (68%), Positives = 104/128 (81%)
 Frame = +2

Query: 2   CLISPQKVNFLLNGTGVDRRSNVFMDNGPQLPTNVTKLLKYGTNLLQAVGEFNGNYVIIV 181
           CLI+PQ+VNFLLNG GV  R+NV MD GPQ+PTNVT +LK+GTNLLQAVG+FNG YV++V
Sbjct: 241 CLINPQQVNFLLNGKGVLNRTNVQMDPGPQVPTNVTGMLKFGTNLLQAVGQFNGRYVVLV 300

Query: 182 AYMCVVTPPVCPSFQDYVRPAVALPDSDSELIEGASRIALNCPISKKRIKTPVKGHSCNH 361
           AYM        P  QDY++PAV   DSDS++IEGAS+I+LNCPIS  RIKTPVKGHSC H
Sbjct: 301 AYMSFTPFLEDPVLQDYLQPAVTSVDSDSDIIEGASQISLNCPISFTRIKTPVKGHSCKH 360

Query: 362 YQCFDLDN 385
           +QCFD DN
Sbjct: 361 FQCFDFDN 368


>ref|XP_003538690.1| PREDICTED: uncharacterized protein LOC100784204 [Glycine max]
          Length = 876

 Score =  184 bits (466), Expect = 8e-45
 Identities = 89/128 (69%), Positives = 103/128 (80%)
 Frame = +2

Query: 2   CLISPQKVNFLLNGTGVDRRSNVFMDNGPQLPTNVTKLLKYGTNLLQAVGEFNGNYVIIV 181
           CLISPQ+VNFLLNG GV  R+NV MD G Q+PTNVT +LK+GTNLLQAVG+FNG YV++V
Sbjct: 205 CLISPQQVNFLLNGKGVLNRTNVQMDPGAQVPTNVTGMLKFGTNLLQAVGQFNGRYVVLV 264

Query: 182 AYMCVVTPPVCPSFQDYVRPAVALPDSDSELIEGASRIALNCPISKKRIKTPVKGHSCNH 361
           AYM V      P  QDY++PAV   D DS++IEGASRI+LNCPIS  RIKTPVKGHSC H
Sbjct: 265 AYMSVTPLLEDPVLQDYLQPAVTSVDLDSDIIEGASRISLNCPISFTRIKTPVKGHSCKH 324

Query: 362 YQCFDLDN 385
           +QCFD DN
Sbjct: 325 FQCFDFDN 332


Top