BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025061
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522755.1| conserved hypothetical protein [Ricinus comm...    89   3e-16
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    86   2e-15
gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold ...    84   2e-14
ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A...    81   1e-13
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    81   1e-13

>ref|XP_002522755.1| conserved hypothetical protein [Ricinus communis]
           gi|223537993|gb|EEF39606.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/129 (36%), Positives = 64/129 (49%)
 Frame = +2

Query: 2   SLVARVFKARYFPHSSLFDATRGGGASYVWSGLWQAKENLKKGYRWVVGDGRSINVGMDA 181
           +LV+ + KA+YFP      A  G   S VW     AK  L+ G RW VG G SI+V  D 
Sbjct: 15  TLVSHILKAKYFPRGDFISAQLGSNPSSVWC----AKPVLEYGCRWRVGVGSSISVWQDL 70

Query: 182 WLRGKPGHKIDEQYMNALSGLKVCDLFVPGSKEWDVAKVHNLFSSSDASHILAIPVPRNQ 361
           W+          +    L G+KV D  +PG+ EWDV  +H +F   D   IL +P     
Sbjct: 71  WILNDNLFLFRTRVKRVLEGIKVRDFLIPGTNEWDVEMIHEIFEEVDVGDILKLPADLQG 130

Query: 362 VQDRII*SY 388
            +D++I SY
Sbjct: 131 QEDKLIWSY 139


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/118 (34%), Positives = 62/118 (52%)
 Frame = +2

Query: 2    SLVARVFKARYFPHSSLFDATRGGGASYVWSGLWQAKENLKKGYRWVVGDGRSINVGMDA 181
            +L+ R+ +ARYF  S L +A RG   S+ W  +W +K  L +G +W VG G  I V  DA
Sbjct: 882  TLLYRLLQARYFKSSELLEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDA 941

Query: 182  WLRGKPGHKIDEQYMNALSGLKVCDLFVPGSKEWDVAKVHNLFSSSDASHILAIPVPR 355
            W+ G+  H +     ++   LKVCDL       W++  V   F   +   +L+IP+ R
Sbjct: 942  WILGEGAHMVPTPQADSNLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSR 999


>gb|ABN07957.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 380

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/124 (33%), Positives = 67/124 (54%)
 Frame = +2

Query: 2   SLVARVFKARYFPHSSLFDATRGGGASYVWSGLWQAKENLKKGYRWVVGDGRSINVGMDA 181
           SL+ ++ KA+YFPHS  F A+ G   SYVW  LW  ++ LK G +W +G G +I+V    
Sbjct: 43  SLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGMGETISVWNQP 102

Query: 182 WLRGKPGHKIDEQYMNALSGLKVCDLFVPGSKEWDVAKVHNLFSSSDASHILAIPVPRNQ 361
           WL+     +   +       L V  LF P +KEW+   +  +F++  ++ IL  P+ ++ 
Sbjct: 103 WLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQILQTPLLQSV 162

Query: 362 VQDR 373
             D+
Sbjct: 163 QVDK 166


>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 776

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2   SLVARVFKARYFPHSSLFDATRGGGASYVWSGLWQAKENLKKGYRWVVGDGRSINVGMDA 181
           S  AR+ KA+YFPH +L D      +S VW G+    + LKKGY W +G+GRS+++    
Sbjct: 75  SFCARLIKAKYFPHGNLLDTAVIQSSSPVWQGIKHGLDLLKKGYIWRIGNGRSVDIWRHN 134

Query: 182 WLRGKPGHKIDEQYMNALSGL-KVCDLFVPGSKEWDVAKVHNLFSSSDASHILAIPVPRN 358
           WL   P   +        + L +V DL +PG   W+   +H +F   DA  IL I +P  
Sbjct: 135 WL---PRGNLQVSGTAGNTRLRRVSDLMLPGLHTWNEELIHQIFYPHDADAILQITLPNY 191

Query: 359 QVQD 370
            V D
Sbjct: 192 DVDD 195


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
 Frame = +2

Query: 2    SLVARVFKARYFPHSSLFDATRGGGASYVWSGLWQAKENLKKGYRWVVGDGRSINVGMDA 181
            SL+A+VFK+RYF  S   +A  G   S+ W  +++A+  +K+G R V+G+G +INV  D 
Sbjct: 879  SLMAKVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDP 938

Query: 182  WLRGKP---------GHKIDEQYMNALSGLKVCDLFVPGSKEWDVAKVHNLFSSSDASHI 334
            W+  KP          H + +   N++  +K  DL +P  ++W+   V  LF  +   +I
Sbjct: 939  WIGAKPAKAAQAVKRSHLVSQYAANSIHVVK--DLLLPDGRDWNWNLVSLLFPDNTQENI 996

Query: 335  LAIPVPRNQVQDRII*SYS 391
            LA+     + +DR    YS
Sbjct: 997  LALRPGGKETRDRFTWEYS 1015