BLASTX nr result

ID: Bupleurum21_contig00025054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025054
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
ref|XP_003548679.1| PREDICTED: transcription factor TCP8-like [G...   115   3e-24
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...   112   2e-23
ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   112   4e-23
ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [C...   112   4e-23

>ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|222838996|gb|EEE77347.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  124 bits (311), Expect = 8e-27
 Identities = 76/146 (52%), Positives = 84/146 (57%), Gaps = 13/146 (8%)
 Frame = +1

Query: 1   LNVSLRSSGSTLSAPPSKSAPHSFHGALALAHHP-YEEGFSH--MLGF--HHQQNPHILT 165
           LNVSLRSSGSTLSAPPSKSAPHSFH AL L+HHP YEEGF+H   LGF   HQQ  H++T
Sbjct: 234 LNVSLRSSGSTLSAPPSKSAPHSFHSALGLSHHPHYEEGFAHPAFLGFQQQHQQQHHLMT 293

Query: 166 PDQMXXXXXXXXXXXXXXXXXXXXXXXNYLRKRFREDLFKEDGQQQQGEVSA-------D 324
            DQ+                       NY+RKRFREDLFKED  Q+QGE           
Sbjct: 294 ADQIAQALPIGADGGGGGGESRGGGEENYMRKRFREDLFKEDNPQEQGESGGGRGGGGDG 353

Query: 325 XXXXXXXXXXXXMQLPK-QQQEAGSS 399
                       +QLPK QQQE GSS
Sbjct: 354 GEEPPIKAFKSDLQLPKPQQQETGSS 379


>ref|XP_003548679.1| PREDICTED: transcription factor TCP8-like [Glycine max]
          Length = 361

 Score =  115 bits (289), Expect = 3e-24
 Identities = 70/140 (50%), Positives = 78/140 (55%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   LNVSLRSSGSTLSAPPSKSAPHSFHGALALAHHPYEEGFSH--MLGFHHQQNPHILTPDQ 174
           LNVSLRSSGSTLSAPPSKSAPH+FHGALALAHHPYEE F H  +LGFH    PH   P Q
Sbjct: 95  LNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHPALLGFH----PHAHQPQQ 150

Query: 175 MXXXXXXXXXXXXXXXXXXXXXXXNYLRKRFREDLFKEDGQQQQGEVSADXXXXXXXXXX 354
           +                       NYLRKR+REDLFK+D        S +          
Sbjct: 151 L----LSADHIPESLPSGAGDSGDNYLRKRYREDLFKDDNINNNNTQSQNESGDGDGSSP 206

Query: 355 XXMQLPKQQQEAGSSRQHPN 414
              +LPKQQ EAGS    P+
Sbjct: 207 ---KLPKQQSEAGSGLLRPS 223


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score =  112 bits (281), Expect = 2e-23
 Identities = 72/148 (48%), Positives = 81/148 (54%), Gaps = 10/148 (6%)
 Frame = +1

Query: 1   LNVSLRSSGSTLSAPPSKSAPHSFHGALALA-----HHPYEEGFSHMLGFHHQQNPHILT 165
           LN+SLRSSGSTLSAPPSKSAPHSFH ALALA      HP+EEGFS MLGFHH  N H+LT
Sbjct: 209 LNISLRSSGSTLSAPPSKSAPHSFHSALALAAAHQTPHPFEEGFSQMLGFHH--NTHLLT 266

Query: 166 ----PDQMXXXXXXXXXXXXXXXXXXXXXXXNYLRKRFREDLFKEDG-QQQQGEVSADXX 330
                + +                       NYLRKR+REDLFKE+G   QQGE S    
Sbjct: 267 QNPIAESIPGGGGGGGSSGDGGGVGGQEGADNYLRKRYREDLFKEEGSSNQQGEASG--- 323

Query: 331 XXXXXXXXXXMQLPKQQQEAGSSRQHPN 414
                        P  +Q  G+S Q PN
Sbjct: 324 ---------GSSSPSNKQFKGNSPQLPN 342


>ref|XP_004173314.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor TCP8-like,
           partial [Cucumis sativus]
          Length = 486

 Score =  112 bits (279), Expect = 4e-23
 Identities = 73/144 (50%), Positives = 85/144 (59%), Gaps = 11/144 (7%)
 Frame = +1

Query: 1   LNVSLRSSGSTLSAPPSKSAPHSFHG-ALALAHHP--YEEGFSH--MLGFHHQQNP---- 153
           LN+S+RSSGSTLSAPPSKSAPHSFHG ALALAHHP  YEEGF+H  +LGFHHQQ      
Sbjct: 201 LNISIRSSGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGFHHQQQQQQQH 260

Query: 154 --HILTPDQMXXXXXXXXXXXXXXXXXXXXXXXNYLRKRFREDLFKEDGQQQQGEVSADX 327
             +++T DQ+                       NY+RKRFREDLFKED  Q  GE S   
Sbjct: 261 HLNLMTADQI----------GEGLPSGGGESTDNYMRKRFREDLFKED-TQSPGESSG-- 307

Query: 328 XXXXXXXXXXXMQLPKQQQEAGSS 399
                      +QL KQQQ+  +S
Sbjct: 308 GGGSPKAMKTDLQLEKQQQQPSAS 331


>ref|XP_004135523.1| PREDICTED: transcription factor TCP8-like [Cucumis sativus]
          Length = 505

 Score =  112 bits (279), Expect = 4e-23
 Identities = 73/144 (50%), Positives = 85/144 (59%), Gaps = 11/144 (7%)
 Frame = +1

Query: 1   LNVSLRSSGSTLSAPPSKSAPHSFHG-ALALAHHP--YEEGFSH--MLGFHHQQNP---- 153
           LN+S+RSSGSTLSAPPSKSAPHSFHG ALALAHHP  YEEGF+H  +LGFHHQQ      
Sbjct: 168 LNISIRSSGSTLSAPPSKSAPHSFHGAALALAHHPHAYEEGFAHAALLGFHHQQQQQQQH 227

Query: 154 --HILTPDQMXXXXXXXXXXXXXXXXXXXXXXXNYLRKRFREDLFKEDGQQQQGEVSADX 327
             +++T DQ+                       NY+RKRFREDLFKED  Q  GE S   
Sbjct: 228 HLNLMTADQI----------GEGLPSGGGESTDNYMRKRFREDLFKED-TQSPGESSG-- 274

Query: 328 XXXXXXXXXXXMQLPKQQQEAGSS 399
                      +QL KQQQ+  +S
Sbjct: 275 GGGSPKAMKTDLQLEKQQQQPSAS 298


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