BLASTX nr result

ID: Bupleurum21_contig00025052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025052
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523428.1| centromere/microtubule binding protein cbf5,...   111   1e-22
ref|XP_002523427.1| centromere/microtubule binding protein cbf5,...   111   1e-22
ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arab...   110   1e-22
ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arab...   110   1e-22
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   109   3e-22

>ref|XP_002523428.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223537378|gb|EEF39007.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 432

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -3

Query: 576 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTP 421
           CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKL+AEGKLDKHGKPNE TP
Sbjct: 190 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKPNENTP 241


>ref|XP_002523427.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223537377|gb|EEF39006.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 581

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/52 (96%), Positives = 51/52 (98%)
 Frame = -3

Query: 576 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTP 421
           CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKL+AEGKLDKHGKPNE TP
Sbjct: 338 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLIAEGKLDKHGKPNENTP 389


>ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]
           gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA
           ribonucleoprotein complex subunit 4; AltName: Full=CBF5
           homolog; AltName: Full=Dyskerin; AltName:
           Full=Nopp-140-associated protein of 57 kDa homolog;
           Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
           homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis
           thaliana] gi|28392852|gb|AAO41863.1| unknown protein
           [Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646100|gb|AEE79621.1| H/ACA ribonucleoprotein
           complex subunit 4 [Arabidopsis thaliana]
          Length = 565

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = -3

Query: 576 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTP 421
           CDHGVVAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP
Sbjct: 349 CDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTP 400


>ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp.
           lyrata] gi|297323972|gb|EFH54393.1| hypothetical protein
           ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata]
          Length = 561

 Score =  110 bits (276), Expect = 1e-22
 Identities = 49/52 (94%), Positives = 52/52 (100%)
 Frame = -3

Query: 576 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTP 421
           CDHGVVAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP
Sbjct: 349 CDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTP 400


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 589

 Score =  109 bits (273), Expect = 3e-22
 Identities = 48/52 (92%), Positives = 52/52 (100%)
 Frame = -3

Query: 576 CDHGVVAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTP 421
           CDHGVVAKIKRVVMDRDTYPRKWGLGP+ASMKK+L++EGKLDKHGKPNEKTP
Sbjct: 355 CDHGVVAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTP 406


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