BLASTX nr result

ID: Bupleurum21_contig00025051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025051
         (742 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arab...   216   3e-54
ref|XP_002307276.1| predicted protein [Populus trichocarpa] gi|2...   173   4e-41
ref|XP_002337129.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|2...   170   3e-40
ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arab...   169   6e-40

>ref|XP_002893824.1| hypothetical protein ARALYDRAFT_891051 [Arabidopsis lyrata subsp.
           lyrata] gi|297339666|gb|EFH70083.1| hypothetical protein
           ARALYDRAFT_891051 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score =  216 bits (551), Expect = 3e-54
 Identities = 103/179 (57%), Positives = 141/179 (78%)
 Frame = -3

Query: 539 LYSVDYNNEDNKISITELHLLNPYKTFTKKHNTISQVVKHVLTSNK*VEAKEIVLASRLE 360
           LY V+Y ++++K+ IT+L LLNPYK FTK ++T  +V+K+V   +K   A+E+VLAS+LE
Sbjct: 24  LYEVEYVSDESKVPITQLSLLNPYKAFTKSNSTFPKVIKYVFGPHKHA-ARELVLASQLE 82

Query: 359 QVPIPSSEAEQVIPILLREFLPEQWRQQGFTHLHFGAVRMALTLHGRKGLPAVARMTLLD 180
           Q  +P++E EQ+IP+ L E +  QWR  G+THLH+GA+R+ALTL+GRKGLP V R+ LLD
Sbjct: 83  QHLVPTTETEQMIPLRLNEGMIHQWRAYGYTHLHYGAIRVALTLYGRKGLPIVVRVALLD 142

Query: 179 TRLQQYTHACIATVQTTLNAGTMFITLFPNFNLRLDDPLIYKNLNVQLQIVGAPQVAGT 3
           TR ++Y H  IAT+QTTLNA T+F+TLFPNFN+ L+DP IY+N+ +QLQI GAPQV  T
Sbjct: 143 TRYREYQHTYIATIQTTLNASTIFVTLFPNFNVVLEDPQIYQNMQIQLQITGAPQVRNT 201


>ref|XP_002307276.1| predicted protein [Populus trichocarpa] gi|222856725|gb|EEE94272.1|
           predicted protein [Populus trichocarpa]
          Length = 667

 Score =  173 bits (438), Expect = 4e-41
 Identities = 85/181 (46%), Positives = 120/181 (66%)
 Frame = -3

Query: 545 EYLYSVDYNNEDNKISITELHLLNPYKTFTKKHNTISQVVKHVLTSNK*VEAKEIVLASR 366
           +YLY V   N+   IS T+L L+NPY  F K+  ++ + +K ++     V AKE V AS 
Sbjct: 38  DYLYEVSLLNDTQNISETDLPLVNPYHAFAKRSPSVIRSIKTLIKQPSRV-AKEYVQASS 96

Query: 365 LEQVPIPSSEAEQVIPILLREFLPEQWRQQGFTHLHFGAVRMALTLHGRKGLPAVARMTL 186
            +Q  IP++  EQ + + +      QW  QG+TH+HFGA+R+AL+ HG+KGLP  AR+ L
Sbjct: 97  FDQHKIPATSREQFVTLEIPSEFLGQWISQGYTHIHFGAIRLALSYHGQKGLPVAARLAL 156

Query: 185 LDTRLQQYTHACIATVQTTLNAGTMFITLFPNFNLRLDDPLIYKNLNVQLQIVGAPQVAG 6
           LDTR  +Y HACI +++TTLN GT+ +T +PNFN+ LDDP ++  L VQLQI+GA QV  
Sbjct: 157 LDTRYLEYQHACIGSLETTLNCGTVVVTFYPNFNMALDDPQLHHFLKVQLQIIGADQVLD 216

Query: 5   T 3
           T
Sbjct: 217 T 217


>ref|XP_002337129.1| predicted protein [Populus trichocarpa] gi|222838330|gb|EEE76695.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  171 bits (434), Expect = 1e-40
 Identities = 89/188 (47%), Positives = 121/188 (64%), Gaps = 7/188 (3%)
 Frame = -3

Query: 545 EYLYSVDYNNEDNKISITELHLLNPYKTFTKKHNTISQVVKHVLTSNK*VEAKEIVLASR 366
           +YLY V   ++  KIS T+L L+NPY TFTKK  ++ + +K ++     V AKE V AS 
Sbjct: 38  DYLYEVSLLDDTQKISETDLPLVNPYHTFTKKSPSVIRSIKTLIKQPSRV-AKEYVQASS 96

Query: 365 LEQVPIPSSEAEQVIPILLREFLPEQWRQQGFTHLHFGAVRMALTLHGRKGLPAVARMTL 186
            +Q  IP++  E  + + +    P QW  QG+TH+HF A+R+AL+ HGRKGLP  AR+ L
Sbjct: 97  FDQHKIPATSREHFVTLEIPTEFPGQWISQGYTHIHFCAIRLALSYHGRKGLPVAARLAL 156

Query: 185 LDTRLQ-------QYTHACIATVQTTLNAGTMFITLFPNFNLRLDDPLIYKNLNVQLQIV 27
           LDTR         +Y HACI ++QTTLN GT+ +T +PNFN+ LDDP ++  L VQLQI 
Sbjct: 157 LDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFNMALDDPQLHNFLKVQLQIT 216

Query: 26  GAPQVAGT 3
           GA QV  T
Sbjct: 217 GADQVLDT 224


>ref|XP_002318395.1| predicted protein [Populus trichocarpa] gi|222859068|gb|EEE96615.1|
           predicted protein [Populus trichocarpa]
          Length = 1497

 Score =  170 bits (430), Expect = 3e-40
 Identities = 88/188 (46%), Positives = 120/188 (63%), Gaps = 7/188 (3%)
 Frame = -3

Query: 545 EYLYSVDYNNEDNKISITELHLLNPYKTFTKKHNTISQVVKHVLTSNK*VEAKEIVLASR 366
           +Y Y V   ++  KIS T+L L+NPY  FTKK  ++ + +K ++     V AKE V AS 
Sbjct: 38  DYFYEVSLLDDTQKISETDLPLVNPYHAFTKKSPSVIRSIKTLIKQPSRV-AKEYVQASS 96

Query: 365 LEQVPIPSSEAEQVIPILLREFLPEQWRQQGFTHLHFGAVRMALTLHGRKGLPAVARMTL 186
            +Q  IP++  EQ + + +    P QW  QG+TH+HF A+R+AL+ HGRKGLP  AR+ L
Sbjct: 97  FDQHKIPATSREQFVTLEIPTEFPGQWISQGYTHIHFCAIRLALSYHGRKGLPVAARLAL 156

Query: 185 LDTRLQ-------QYTHACIATVQTTLNAGTMFITLFPNFNLRLDDPLIYKNLNVQLQIV 27
           LDTR         +Y HACI ++QTTLN GT+ +T +PNFN+ LDDP ++  L VQLQI 
Sbjct: 157 LDTRYPLLDTRYLEYQHACIGSLQTTLNCGTVVVTFYPNFNMALDDPQLHNFLKVQLQIT 216

Query: 26  GAPQVAGT 3
           GA QV  T
Sbjct: 217 GADQVLDT 224


>ref|XP_002891104.1| hypothetical protein ARALYDRAFT_336508 [Arabidopsis lyrata subsp.
           lyrata] gi|297336946|gb|EFH67363.1| hypothetical protein
           ARALYDRAFT_336508 [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score =  169 bits (428), Expect = 6e-40
 Identities = 76/126 (60%), Positives = 102/126 (80%)
 Frame = -3

Query: 380 VLASRLEQVPIPSSEAEQVIPILLREFLPEQWRQQGFTHLHFGAVRMALTLHGRKGLPAV 201
           + AS+LEQ  + +++ EQ+IP+ L E +  QWR   +THLH+GA+R+ALTLHGRKGL  V
Sbjct: 20  IQASQLEQQLVLTTKTEQMIPLRLNEGMNHQWRAHDYTHLHYGAIRLALTLHGRKGLHVV 79

Query: 200 ARMTLLDTRLQQYTHACIATVQTTLNAGTMFITLFPNFNLRLDDPLIYKNLNVQLQIVGA 21
           AR+ LLDTR ++Y HACIAT+QTTLNAGT+F+TLFPNFN+ L+DP +Y+N+ +QLQI GA
Sbjct: 80  ARVALLDTRYREYQHACIATIQTTLNAGTVFVTLFPNFNVALEDPHVYQNMQIQLQITGA 139

Query: 20  PQVAGT 3
           PQ+  T
Sbjct: 140 PQIGNT 145


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