BLASTX nr result

ID: Bupleurum21_contig00025048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025048
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   125   3e-27
ref|XP_002306631.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-22
ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, par...    99   5e-19
ref|XP_004142697.1| PREDICTED: uncharacterized protein LOC101216...    99   5e-19
emb|CBI19029.3| unnamed protein product [Vitis vinifera]               97   1e-18

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/145 (46%), Positives = 100/145 (68%), Gaps = 5/145 (3%)
 Frame = -1

Query: 420  GMCLYAKHMNETSTDMVSSN-VDLAWEMLAASTNMMALGKLVNQDKK----GIKSSEMNL 256
            G C Y+K++    + + S   VDLA EMLA++TN MALGKL   + +      K  +M +
Sbjct: 1006 GFCFYSKYIAAAGSILGSDYMVDLASEMLASTTNTMALGKLTRPEMRMNWTSRKGVQMEV 1065

Query: 255  PKSVFLSQRDLSSSLCSVVQSIIPTRSYLSVKGDALHEYLSSLSQISRSEANRLSESLDK 76
            PKS    + +    LC++VQS++P++SYL VKG A HEYLSSLSQISRSEA+RLSE++++
Sbjct: 1066 PKSDISLRSETEPCLCNIVQSVVPSKSYLGVKGHAFHEYLSSLSQISRSEASRLSENINQ 1125

Query: 75   SRKRRLRVAKNYLSATTPSLTPEDM 1
            +++RR R +++YLS     L+P+D+
Sbjct: 1126 NKRRRGRASRHYLSTGACMLSPDDI 1150


>ref|XP_002306631.1| predicted protein [Populus trichocarpa] gi|222856080|gb|EEE93627.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  108 bits (271), Expect = 3e-22
 Identities = 59/146 (40%), Positives = 94/146 (64%), Gaps = 6/146 (4%)
 Frame = -1

Query: 420 GMCLYAKHMNETSTDM-VSSNVDLAWEMLAASTNMMALGKLVNQDKKGIKS-----SEMN 259
           G C YAK +      M + S VD  WEML+ ++ MM  G LV ++     S     +EM+
Sbjct: 9   GFCFYAKELANAGLKMGLESKVDFTWEMLSTAS-MMEFGNLVRRNLSSKSSHSGMSTEMS 67

Query: 258 LPKSVFLSQRDLSSSLCSVVQSIIPTRSYLSVKGDALHEYLSSLSQISRSEANRLSESLD 79
           LP++   S  ++ SSL  +++SI+P+R+Y+++KGDA +EY SSL  I+RSEA+R S S+ 
Sbjct: 68  LPENGTSSNSEMKSSLRDIIESIVPSRAYMTMKGDAFYEYQSSLCHIARSEASRFSASIV 127

Query: 78  KSRKRRLRVAKNYLSATTPSLTPEDM 1
           +++ RR R ++NYLS  +  L+PE++
Sbjct: 128 RTKGRRARASRNYLSNGSLILSPEEI 153


>ref|XP_004172956.1| PREDICTED: uncharacterized LOC101216488, partial [Cucumis sativus]
          Length = 571

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -1

Query: 420 GMCLYAKHMNETSTDM-VSSNVDLAWEMLAASTNMMALGKLVNQDKKGIKSSEMNLPKSV 244
           G  L A  +  T + +   S+VD+  EMLA++TN  ALGKL+       K  + +LP   
Sbjct: 416 GFSLIANDIATTGSHVGCDSSVDIVSEMLASTTNTAALGKLLRHSST-TKILKPSLPGYC 474

Query: 243 FLSQRDLSSSLCSVVQSIIPTRSYLSVKGDALHEYLSSLSQISRSEANRLSESLDKSRKR 64
            +  RD+ S L  V+Q + P R YLS+KG    EYLSSL  ISRSE  R+S   DK+++R
Sbjct: 475 HMLDRDMKSHLFDVIQKVAPNRLYLSLKGVQFFEYLSSLRCISRSETLRISRGPDKTKRR 534

Query: 63  RLRVAKNYLSATTPSLTPEDM 1
           R RVA++YLS  +   +PED+
Sbjct: 535 RGRVARHYLSTGSHLFSPEDI 555


>ref|XP_004142697.1| PREDICTED: uncharacterized protein LOC101216488 [Cucumis sativus]
          Length = 1209

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 60/141 (42%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
 Frame = -1

Query: 420  GMCLYAKHMNETSTDM-VSSNVDLAWEMLAASTNMMALGKLVNQDKKGIKSSEMNLPKSV 244
            G  L A  +  T + +   S+VD+  EMLA++TN  ALGKL+       K  + +LP   
Sbjct: 1054 GFSLIANDIATTGSHVGCDSSVDIVSEMLASTTNTAALGKLLRHSST-TKILKPSLPGYC 1112

Query: 243  FLSQRDLSSSLCSVVQSIIPTRSYLSVKGDALHEYLSSLSQISRSEANRLSESLDKSRKR 64
             +  RD+ S L  V+Q + P R YLS+KG    EYLSSL  ISRSE  R+S   DK+++R
Sbjct: 1113 HMLDRDMKSHLFDVIQKVAPNRLYLSLKGVQFFEYLSSLRCISRSETLRISRGPDKTKRR 1172

Query: 63   RLRVAKNYLSATTPSLTPEDM 1
            R RVA++YLS  +   +PED+
Sbjct: 1173 RGRVARHYLSTGSHLFSPEDI 1193


>emb|CBI19029.3| unnamed protein product [Vitis vinifera]
          Length = 919

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/88 (51%), Positives = 68/88 (77%)
 Frame = -1

Query: 264  MNLPKSVFLSQRDLSSSLCSVVQSIIPTRSYLSVKGDALHEYLSSLSQISRSEANRLSES 85
            M +PKS    + +    LC++VQS++P++SYL VKG A HEYLSSLSQISRSEA+RLSE+
Sbjct: 812  MEVPKSDISLRSETEPCLCNIVQSVVPSKSYLGVKGHAFHEYLSSLSQISRSEASRLSEN 871

Query: 84   LDKSRKRRLRVAKNYLSATTPSLTPEDM 1
            ++++++RR R +++YLS     L+P+D+
Sbjct: 872  INQNKRRRARASRHYLSTGACMLSPDDI 899


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