BLASTX nr result

ID: Bupleurum21_contig00025045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025045
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM63155.1| ATP synthase beta subunit [Angelica sylvestris]        225   3e-57
ref|YP_740124.1| ATP synthase CF1 beta subunit [Daucus carota] g...   224   6e-57
ref|YP_004935559.1| ATP synthase CF1 beta subunit (chloroplast) ...   224   7e-57
gb|ADM63160.1| ATP synthase beta subunit [Pseudopanax colensoi]       224   7e-57
gb|ADM63143.1| ATP synthase beta subunit [Polyscias guilfoylei]       224   7e-57

>gb|ADM63155.1| ATP synthase beta subunit [Angelica sylvestris]
          Length = 489

 Score =  225 bits (574), Expect = 3e-57
 Identities = 111/114 (97%), Positives = 114/114 (100%)
 Frame = +2

Query: 8   EKKNLGNITQIIGPVLDVSFPPGKLPNIYNALVVKGRDTAGEQINVTCEVQQLLGNNRVR 187
           EKKNLGNITQIIGPVLDV+FPPGK+PNIYNALVVKGRDTAG+QINVTCEVQQLLGNNRVR
Sbjct: 8   EKKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVR 67

Query: 188 AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 349
           AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT
Sbjct: 68  AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 121


>ref|YP_740124.1| ATP synthase CF1 beta subunit [Daucus carota]
           gi|122233834|sp|Q0G9V5.1|ATPB_DAUCA RecName: Full=ATP
           synthase subunit beta, chloroplastic; AltName: Full=ATP
           synthase F1 sector subunit beta; AltName: Full=F-ATPase
           subunit beta gi|113200915|gb|ABI32431.1| ATP synthase
           CF1 beta subunit [Daucus carota]
          Length = 498

 Score =  224 bits (571), Expect = 6e-57
 Identities = 110/114 (96%), Positives = 114/114 (100%)
 Frame = +2

Query: 8   EKKNLGNITQIIGPVLDVSFPPGKLPNIYNALVVKGRDTAGEQINVTCEVQQLLGNNRVR 187
           EKKNLGNITQIIGPVLDV+FPPGK+PNIYNALVVKGRDTAG+QINVTCEVQQLLGNNRVR
Sbjct: 16  EKKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTAGQQINVTCEVQQLLGNNRVR 75

Query: 188 AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 349
           AVAMSATDGLTRGMEV+DTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT
Sbjct: 76  AVAMSATDGLTRGMEVMDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 129


>ref|YP_004935559.1| ATP synthase CF1 beta subunit (chloroplast) [Eleutherococcus
           senticosus] gi|347448214|gb|AEO92626.1| ATP synthase CF1
           beta subunit (chloroplast) [Eleutherococcus senticosus]
          Length = 498

 Score =  224 bits (570), Expect = 7e-57
 Identities = 110/114 (96%), Positives = 113/114 (99%)
 Frame = +2

Query: 8   EKKNLGNITQIIGPVLDVSFPPGKLPNIYNALVVKGRDTAGEQINVTCEVQQLLGNNRVR 187
           EKKNLGNITQIIGPVLDV+FPPGK+PNIYNALVVKGRDT G+QINVTCEVQQLLGNNRVR
Sbjct: 16  EKKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVR 75

Query: 188 AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 349
           AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT
Sbjct: 76  AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 129


>gb|ADM63160.1| ATP synthase beta subunit [Pseudopanax colensoi]
          Length = 489

 Score =  224 bits (570), Expect = 7e-57
 Identities = 110/114 (96%), Positives = 113/114 (99%)
 Frame = +2

Query: 8   EKKNLGNITQIIGPVLDVSFPPGKLPNIYNALVVKGRDTAGEQINVTCEVQQLLGNNRVR 187
           EKKNLGNITQIIGPVLDV+FPPGK+PNIYNALVVKGRDT G+QINVTCEVQQLLGNNRVR
Sbjct: 8   EKKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVR 67

Query: 188 AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 349
           AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT
Sbjct: 68  AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 121


>gb|ADM63143.1| ATP synthase beta subunit [Polyscias guilfoylei]
          Length = 489

 Score =  224 bits (570), Expect = 7e-57
 Identities = 110/114 (96%), Positives = 113/114 (99%)
 Frame = +2

Query: 8   EKKNLGNITQIIGPVLDVSFPPGKLPNIYNALVVKGRDTAGEQINVTCEVQQLLGNNRVR 187
           EKKNLGNITQIIGPVLDV+FPPGK+PNIYNALVVKGRDT G+QINVTCEVQQLLGNNRVR
Sbjct: 8   EKKNLGNITQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVR 67

Query: 188 AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 349
           AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT
Sbjct: 68  AVAMSATDGLTRGMEVIDTGAPLSVPVGGTTLGRIFNVLGEPVDNLGPVDTRTT 121


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