BLASTX nr result

ID: Bupleurum21_contig00025011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025011
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|2...   172   5e-41
ref|XP_002524384.1| conserved hypothetical protein [Ricinus comm...   169   4e-40
ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262...   169   6e-40
ref|XP_003518017.1| PREDICTED: uncharacterized protein LOC100809...   151   1e-34
emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]   141   1e-31

>ref|XP_002315967.1| predicted protein [Populus trichocarpa] gi|222865007|gb|EEF02138.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score =  172 bits (436), Expect = 5e-41
 Identities = 98/157 (62%), Positives = 121/157 (77%), Gaps = 9/157 (5%)
 Frame = -1

Query: 481 MRTIMAKTPQDSSFSFSRRYFHWKKNV-NDNDDMEEVLTFNSSRLSEDQLKLDELDLSVH 305
           M+TIMAKTP DSSFSFSRR+F+W+K V  D +D EE+LTFNSS   E+     EL +++ 
Sbjct: 1   MKTIMAKTPHDSSFSFSRRHFNWRKKVVEDEEDDEEILTFNSSSHCEELENDQELRITMP 60

Query: 304 SLPS--SVPKKKR-SIMSVSNLRSAFT-FSKSKS----GLGTKVICTLFGYRHGHIHVAF 149
           +  +  SVP+KK   I++ S LRSA T FSKS+S    GLGT+V+ TLFGYR GH+H AF
Sbjct: 61  AAGTTQSVPRKKTLPILAFSKLRSALTVFSKSRSAYHSGLGTRVVGTLFGYRRGHVHFAF 120

Query: 148 QDDAKLSPAFLIELATPTSVLVREMASGVVRIALECD 38
           Q+DAK +PA LIELATPTSVLVREMASG+VRIALEC+
Sbjct: 121 QEDAKQNPALLIELATPTSVLVREMASGLVRIALECE 157


>ref|XP_002524384.1| conserved hypothetical protein [Ricinus communis]
           gi|223536345|gb|EEF37995.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  169 bits (429), Expect = 4e-40
 Identities = 97/153 (63%), Positives = 117/153 (76%), Gaps = 9/153 (5%)
 Frame = -1

Query: 469 MAKTPQDSSFSFSRRYFHWKKN-VNDNDDMEEVLTFNSSR---LSEDQLKLDELDLSVHS 302
           MAKTPQDSSFSFSRRYF+WKK  V D+DD +E+LTFNSS      E++LK D+ +L +  
Sbjct: 1   MAKTPQDSSFSFSRRYFNWKKKIVEDDDDDQEILTFNSSSHFSSCEEELK-DDQELRI-I 58

Query: 301 LPSSVPKKKRSIMSVSNLRSAFT-FSKSKS----GLGTKVICTLFGYRHGHIHVAFQDDA 137
           LP    KKK  ++SVS LRSA T F  S+S    GL TK++ T+FGYR GH+H+AFQ D 
Sbjct: 59  LPQQSHKKKLPVISVSKLRSALTVFGMSRSAYHSGLATKLVGTIFGYRRGHVHLAFQVDV 118

Query: 136 KLSPAFLIELATPTSVLVREMASGVVRIALECD 38
           KL+P FLIELATPTSVLVREMASG+VRIALEC+
Sbjct: 119 KLNPPFLIELATPTSVLVREMASGLVRIALECE 151


>ref|XP_003631229.1| PREDICTED: uncharacterized protein LOC100262757 [Vitis vinifera]
           gi|297737883|emb|CBI27084.3| unnamed protein product
           [Vitis vinifera]
          Length = 262

 Score =  169 bits (427), Expect = 6e-40
 Identities = 96/158 (60%), Positives = 112/158 (70%), Gaps = 10/158 (6%)
 Frame = -1

Query: 481 MRTIMAKTPQDSSFSFSRRYFHWKKNVNDNDDM--EEVLTFNSS-RLSEDQLKLDELDLS 311
           M+TI+AKTP DSSFSFSRRYFHWKK + D+DD   EEVLTF+SS    +D+ K  E D  
Sbjct: 1   MKTILAKTPHDSSFSFSRRYFHWKKKIEDDDDDNDEEVLTFSSSSHACDDEDKEKEADFI 60

Query: 310 VHSLPSSVPKKKRSIMSVSNLRSAFTF-------SKSKSGLGTKVICTLFGYRHGHIHVA 152
             SL  + P+KK ++ S   LRSA          S   SGLGT+VI TLFGYR GH+H A
Sbjct: 61  STSLSLAAPRKKAALSS--KLRSALALTLFGKRRSHLSSGLGTRVIGTLFGYRRGHVHFA 118

Query: 151 FQDDAKLSPAFLIELATPTSVLVREMASGVVRIALECD 38
           FQ+D K  PAFL+ELAT TSVLVREMASG+VRIALECD
Sbjct: 119 FQEDPKSHPAFLMELATSTSVLVREMASGLVRIALECD 156


>ref|XP_003518017.1| PREDICTED: uncharacterized protein LOC100809083 [Glycine max]
          Length = 290

 Score =  151 bits (381), Expect = 1e-34
 Identities = 90/171 (52%), Positives = 110/171 (64%), Gaps = 23/171 (13%)
 Frame = -1

Query: 481 MRTIMA-KTPQDSSFSFSRRYFHWKKN-VNDNDDMEEVLTFNSS--RLSEDQLKLDELDL 314
           M+TIMA K+P DSSFSFSRRYFHWKK  ++++DD EE+L F+SS     E+     E   
Sbjct: 1   MKTIMAAKSPHDSSFSFSRRYFHWKKKALDESDDEEEILNFSSSSSHFPEEVDDNQEEHY 60

Query: 313 SVHSLPSSVP-------KKKRSIMSVSNLRSAFTF------------SKSKSGLGTKVIC 191
             H L   +P       KKK      S  +SA T             +K+ S LGT+V+ 
Sbjct: 61  HPHHLTLQMPQHGAISTKKKPYFSKKSKFKSALTVFTTRVPRLGLHHNKNSSSLGTRVVG 120

Query: 190 TLFGYRHGHIHVAFQDDAKLSPAFLIELATPTSVLVREMASGVVRIALECD 38
           TLFG+R GH+H AFQ+D KL PAFLIELATPTSVLVREMASG+VRIALEC+
Sbjct: 121 TLFGHRRGHVHFAFQEDPKLGPAFLIELATPTSVLVREMASGLVRIALECE 171


>emb|CAN74875.1| hypothetical protein VITISV_038922 [Vitis vinifera]
          Length = 248

 Score =  141 bits (355), Expect = 1e-31
 Identities = 82/142 (57%), Positives = 97/142 (68%), Gaps = 10/142 (7%)
 Frame = -1

Query: 433 SRRYFHWKKNVNDNDDM--EEVLTFNSS-RLSEDQLKLDELDLSVHSLPSSVPKKKRSIM 263
           +RRYFHWKK + D+DD   EEVLTF+SS    +D+ K  E D    SL  + P+KK ++ 
Sbjct: 3   ARRYFHWKKKIEDDDDDNDEEVLTFSSSSHACDDEDKEKEADFISTSLSLAAPRKKAALS 62

Query: 262 SVSNLRSAFTF-------SKSKSGLGTKVICTLFGYRHGHIHVAFQDDAKLSPAFLIELA 104
           S   LRSA          S   SGLGT+VI TLFGYR GH+H AFQ+D K  PAFL+ELA
Sbjct: 63  S--KLRSALALTLFGKRRSHLSSGLGTRVIGTLFGYRRGHVHFAFQEDPKSHPAFLMELA 120

Query: 103 TPTSVLVREMASGVVRIALECD 38
           T TSVLVREMASG+VRIALECD
Sbjct: 121 TSTSVLVREMASGLVRIALECD 142


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