BLASTX nr result

ID: Bupleurum21_contig00025003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00025003
         (1045 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25902.3| unnamed protein product [Vitis vinifera]              159   1e-36
ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211...   150   5e-34
ref|XP_002310575.1| predicted protein [Populus trichocarpa] gi|2...   142   1e-31
gb|ADD09619.1| unknown [Trifolium repens]                             141   3e-31
ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853...   133   6e-29

>emb|CBI25902.3| unnamed protein product [Vitis vinifera]
          Length = 298

 Score =  159 bits (402), Expect = 1e-36
 Identities = 94/211 (44%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
 Frame = +3

Query: 267 GSEPKDERVGSQGERSSTVSDQLGTDVAXXXXXXXXXXXXXS--------SKFEFNDCLR 422
           GSEP +    + GE+       + +DV                       +++   D  R
Sbjct: 87  GSEPSESEGYNFGEKCQDDDQIIASDVTQKGPSLGSCGNDGKGAPVVDMPNRYGSVDFSR 146

Query: 423 FPESQESRS-GLERCVGHKGVGVSHSPVGMDFIKTCSCSFCTKAGYILSDLHYQDITGRL 599
           F ESQ S+S  L RC G K    S+  V  + +K CSC FC KA YI SDLHYQDI GR+
Sbjct: 147 FAESQGSKSFELGRCTGLKNDACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRI 206

Query: 600 AALKKSRKEANILVQRSTTNKALNIHGQAKPD-VERLQSNLMGQWKSLFLHVEDIYGHES 776
           AALKKS+KEA+ILVQRS   K  + HG   P+   +L+S LMGQW+SLFL + DI  HE+
Sbjct: 207 AALKKSQKEASILVQRSCRAKETDAHGHVNPNKASKLESELMGQWRSLFLSMGDILAHEN 266

Query: 777 NQLVANLNTLKNLRDNCKTELESINGIYSDK 869
            QL ++  TLK+LR+NCKT LE  N + SDK
Sbjct: 267 GQLQSSFLTLKDLRENCKTNLELTNRMPSDK 297


>ref|XP_004143561.1| PREDICTED: uncharacterized protein LOC101211834 [Cucumis sativus]
           gi|449504893|ref|XP_004162324.1| PREDICTED:
           uncharacterized LOC101211834 [Cucumis sativus]
          Length = 189

 Score =  150 bits (379), Expect = 5e-34
 Identities = 77/161 (47%), Positives = 108/161 (67%), Gaps = 1/161 (0%)
 Frame = +3

Query: 390 SSKFEFNDCLRFPESQESRS-GLERCVGHKGVGVSHSPVGMDFIKTCSCSFCTKAGYILS 566
           SS  + ++  R P S+ S+S GL+RC G K    +++ +  D +KTCSCSFC KA YI S
Sbjct: 29  SSNHDSSEWSRMPISEGSKSLGLDRCSGLKTSNCANADMYDDLLKTCSCSFCLKASYIWS 88

Query: 567 DLHYQDITGRLAALKKSRKEANILVQRSTTNKALNIHGQAKPDVERLQSNLMGQWKSLFL 746
           DLHYQDI GR++ALKKS+K+A+IL Q+S+  K    HGQ      +L+ +L GQW SLF 
Sbjct: 89  DLHYQDIKGRISALKKSQKDASILAQKSSKEKE-TYHGQGNSSSSKLELDLCGQWMSLFR 147

Query: 747 HVEDIYGHESNQLVANLNTLKNLRDNCKTELESINGIYSDK 869
           H+ED + HE NQL ++  +LK+LR++CK  LE  N +  +K
Sbjct: 148 HMEDTFAHEGNQLQSSFVSLKDLREDCKMNLEMFNAMPMEK 188


>ref|XP_002310575.1| predicted protein [Populus trichocarpa] gi|222853478|gb|EEE91025.1|
           predicted protein [Populus trichocarpa]
          Length = 355

 Score =  142 bits (358), Expect = 1e-31
 Identities = 76/151 (50%), Positives = 99/151 (65%), Gaps = 2/151 (1%)
 Frame = +3

Query: 420 RFPESQESRS-GLERCVGHKGVGVSHSPVGMDFIKTCSCSFCTKAGYILSDLHYQDITGR 596
           R P SQ  +S  LE+C   KG   ++   G D +K CSCSFC KA YI SDL+YQDI GR
Sbjct: 203 RLPNSQGLKSFELEKCTTLKGDVCANLNAGADMLKACSCSFCLKAAYIWSDLYYQDIKGR 262

Query: 597 LAALKKSRKEANILVQRSTTNKALNIHGQAKPDVE-RLQSNLMGQWKSLFLHVEDIYGHE 773
            +ALKKS+KEA ILV + +  K  +IH Q   +    L+S+L   W+SLF H+ED++ +E
Sbjct: 263 QSALKKSQKEAGILVNKYSRGKQTDIHSQVNSNKSLNLESDLTDHWRSLFRHMEDMFANE 322

Query: 774 SNQLVANLNTLKNLRDNCKTELESINGIYSD 866
           S+QL     TLK+LRDNCK +LE I G+ SD
Sbjct: 323 SSQLQTGYVTLKDLRDNCKIDLERITGMPSD 353


>gb|ADD09619.1| unknown [Trifolium repens]
          Length = 291

 Score =  141 bits (355), Expect = 3e-31
 Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
 Frame = +3

Query: 450 GLERCVGHKGVGVSHSPV-----GMDFIKTCSCSFCTKAGYILSDLHYQDITGRLAALKK 614
           GLERC G KG G + S       G++F+K C+CSFCTKA +I SDLHYQD+ GRL AL+K
Sbjct: 143 GLERCSGLKGHGGADSDAHVGDAGIEFVKNCTCSFCTKAAHIWSDLHYQDVKGRLTALRK 202

Query: 615 SRKEANILVQR----STTNKALNIHGQAKPDVERLQSNLMGQWKSLFLHVEDIYGHESNQ 782
           S+KEA ++VQ+    S T+  ++   Q   D   L+S LM QWKSLF+H+E+I GHES Q
Sbjct: 203 SQKEARLVVQKFSGISDTHNIIH-EQQGGVDPSDLESALMHQWKSLFVHMENILGHESRQ 261

Query: 783 LVANLNTLKNLRDNCKTELESIN 851
           L ++   LK+LR+NCK +L+S N
Sbjct: 262 LESSFERLKDLRENCKNDLDSTN 284


>ref|XP_003635516.1| PREDICTED: uncharacterized protein LOC100853094 [Vitis vinifera]
          Length = 347

 Score =  133 bits (335), Expect = 6e-29
 Identities = 80/184 (43%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
 Frame = +3

Query: 267 GSEPKDERVGSQGERSSTVSDQLGTDVAXXXXXXXXXXXXXS--------SKFEFNDCLR 422
           GSEP +    + GE+       + +DV                       +++   D  R
Sbjct: 156 GSEPSESEGYNFGEKCQDDDQIIASDVTQKGPSLGSCGNDGKGAPVVDMPNRYGSVDFSR 215

Query: 423 FPESQESRS-GLERCVGHKGVGVSHSPVGMDFIKTCSCSFCTKAGYILSDLHYQDITGRL 599
           F ESQ S+S  L RC G K    S+  V  + +K CSC FC KA YI SDLHYQDI GR+
Sbjct: 216 FAESQGSKSFELGRCTGLKNDACSNLNVDANMLKACSCPFCLKAAYIWSDLHYQDIKGRI 275

Query: 600 AALKKSRKEANILVQRSTTNKALNIHGQAKPD-VERLQSNLMGQWKSLFLHVEDIYGHES 776
           AALKKS+KEA+ILVQRS   K  + HG   P+   +L+S LMGQW+SLFL + DI  HE+
Sbjct: 276 AALKKSQKEASILVQRSCRAKETDAHGHVNPNKASKLESELMGQWRSLFLSMGDILAHEN 335

Query: 777 NQLV 788
            QLV
Sbjct: 336 GQLV 339


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