BLASTX nr result

ID: Bupleurum21_contig00024996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024996
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514068.1| Charged multivesicular body protein 2a, puta...   250   2e-64
gb|AFK37485.1| unknown [Lotus japonicus]                              249   3e-64
ref|XP_002330482.1| predicted protein [Populus trichocarpa] gi|2...   249   5e-64
ref|XP_004141696.1| PREDICTED: vacuolar protein sorting-associat...   248   9e-64
ref|XP_003546475.1| PREDICTED: vacuolar protein sorting-associat...   247   2e-63

>ref|XP_002514068.1| Charged multivesicular body protein 2a, putative [Ricinus communis]
           gi|223546524|gb|EEF48022.1| Charged multivesicular body
           protein 2a, putative [Ricinus communis]
          Length = 223

 Score =  250 bits (638), Expect = 2e-64
 Identities = 129/134 (96%), Positives = 131/134 (97%)
 Frame = +2

Query: 314 MSFLFGNRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVEIKKTAKQGQMGAVK 493
           MSFLFG RKTPAELLRENKRM+DKSIREIERERQGLQ QEKKLI EIKK+AKQGQMGAVK
Sbjct: 1   MSFLFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 494 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 673
           VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 674 SLQKIMQEFERQNE 715
           SLQKIMQEFERQNE
Sbjct: 121 SLQKIMQEFERQNE 134


>gb|AFK37485.1| unknown [Lotus japonicus]
          Length = 224

 Score =  249 bits (637), Expect = 3e-64
 Identities = 128/134 (95%), Positives = 133/134 (99%)
 Frame = +2

Query: 314 MSFLFGNRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVEIKKTAKQGQMGAVK 493
           MSFLFG+RKTPAELLRENKRM+DKSIREI+RERQGLQNQEKKLIVEIKK AKQGQMGAV+
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIKRERQGLQNQEKKLIVEIKKNAKQGQMGAVR 60

Query: 494 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 673
           VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNR+MNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRRMNLP 120

Query: 674 SLQKIMQEFERQNE 715
           SLQKIMQEFERQNE
Sbjct: 121 SLQKIMQEFERQNE 134


>ref|XP_002330482.1| predicted protein [Populus trichocarpa] gi|222872416|gb|EEF09547.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  249 bits (635), Expect = 5e-64
 Identities = 128/134 (95%), Positives = 131/134 (97%)
 Frame = +2

Query: 314 MSFLFGNRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVEIKKTAKQGQMGAVK 493
           MSFLFG +KTPAELLRENKRM+DKSIREIERERQGLQ QEKKLI EIKK+AKQGQMGAVK
Sbjct: 1   MSFLFGKKKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVK 60

Query: 494 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 673
           VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 674 SLQKIMQEFERQNE 715
           SLQKIMQEFERQNE
Sbjct: 121 SLQKIMQEFERQNE 134


>ref|XP_004141696.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           1-like [Cucumis sativus]
           gi|449525950|ref|XP_004169979.1| PREDICTED: vacuolar
           protein sorting-associated protein 2 homolog 1-like
           [Cucumis sativus]
          Length = 220

 Score =  248 bits (633), Expect = 9e-64
 Identities = 126/134 (94%), Positives = 133/134 (99%)
 Frame = +2

Query: 314 MSFLFGNRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVEIKKTAKQGQMGAVK 493
           MSFLFG+RKTPAELLRENKRM+DKSIREIERERQGLQ+QEKKLIVEIKK AKQGQMGAVK
Sbjct: 1   MSFLFGSRKTPAELLRENKRMLDKSIREIERERQGLQSQEKKLIVEIKKNAKQGQMGAVK 60

Query: 494 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 673
           +MAKDLIRTRHQIEKFYKLKSQLQGV+LRIQTLKSTQAMG+AMKGVTKAMGQMNRQMNLP
Sbjct: 61  IMAKDLIRTRHQIEKFYKLKSQLQGVALRIQTLKSTQAMGDAMKGVTKAMGQMNRQMNLP 120

Query: 674 SLQKIMQEFERQNE 715
           +LQKIMQEFERQNE
Sbjct: 121 ALQKIMQEFERQNE 134


>ref|XP_003546475.1| PREDICTED: vacuolar protein sorting-associated protein 2 homolog
           1-like [Glycine max]
          Length = 223

 Score =  247 bits (631), Expect = 2e-63
 Identities = 125/134 (93%), Positives = 131/134 (97%)
 Frame = +2

Query: 314 MSFLFGNRKTPAELLRENKRMIDKSIREIERERQGLQNQEKKLIVEIKKTAKQGQMGAVK 493
           MSF+FG RKTPAELLRENKRM+DKSIREIERERQGLQ QEKKLI EIKK+AKQGQMGAV+
Sbjct: 1   MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLIAEIKKSAKQGQMGAVR 60

Query: 494 VMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 673
           VMAKDL+RTRHQ+EKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP
Sbjct: 61  VMAKDLVRTRHQVEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLP 120

Query: 674 SLQKIMQEFERQNE 715
           SLQKIMQEFERQNE
Sbjct: 121 SLQKIMQEFERQNE 134


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