BLASTX nr result

ID: Bupleurum21_contig00024977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024977
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN26040.1| unknown [Zea mays] gi|223944879|gb|ACN26523.1| un...   167   8e-40
gb|ACG42494.1| cyclin-A2 [Zea mays]                                   167   8e-40
ref|NP_001147088.1| cyclin-A2 [Zea mays] gi|195607136|gb|ACG2539...   167   8e-40
ref|NP_001066828.1| Os12g0502300 [Oryza sativa Japonica Group] g...   166   1e-39
gb|EEE53262.1| hypothetical protein OsJ_36196 [Oryza sativa Japo...   166   1e-39

>gb|ACN26040.1| unknown [Zea mays] gi|223944879|gb|ACN26523.1| unknown [Zea mays]
           gi|413934902|gb|AFW69453.1| cyclin superfamily protein,
           putative isoform 1 [Zea mays]
           gi|413934903|gb|AFW69454.1| cyclin superfamily protein,
           putative isoform 2 [Zea mays]
          Length = 489

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/121 (71%), Positives = 97/121 (80%)
 Frame = +3

Query: 3   LVEVSEEYKLVPDTLYLTVHLIDLFLSEHYIEKKRLQLLGITCMLIASHKLLFLSMV*RK 182
           LVEVSEEYKLVPDTLYLTV+LID FLS +YIE++RLQL+GIT ML+AS           K
Sbjct: 267 LVEVSEEYKLVPDTLYLTVYLIDRFLSRNYIERQRLQLVGITSMLVAS-----------K 315

Query: 183 YEEICAPRIEELCFITDNTYTKTEVLTMESKVLKDLRFQLSAPTAKTFLRRYLRAAQACN 362
           YEEICAPR+EE CFITDNTYTK EVL MES++L DL F LS PT KTFLRR+LRAAQA  
Sbjct: 316 YEEICAPRVEEFCFITDNTYTKAEVLKMESQLLNDLGFNLSVPTTKTFLRRFLRAAQASR 375

Query: 363 K 365
           K
Sbjct: 376 K 376


>gb|ACG42494.1| cyclin-A2 [Zea mays]
          Length = 489

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/121 (71%), Positives = 97/121 (80%)
 Frame = +3

Query: 3   LVEVSEEYKLVPDTLYLTVHLIDLFLSEHYIEKKRLQLLGITCMLIASHKLLFLSMV*RK 182
           LVEVSEEYKLVPDTLYLTV+LID FLS +YIE++RLQL+GIT ML+AS           K
Sbjct: 267 LVEVSEEYKLVPDTLYLTVYLIDRFLSRNYIERQRLQLVGITSMLVAS-----------K 315

Query: 183 YEEICAPRIEELCFITDNTYTKTEVLTMESKVLKDLRFQLSAPTAKTFLRRYLRAAQACN 362
           YEEICAPR+EE CFITDNTYTK EVL MES++L DL F LS PT KTFLRR+LRAAQA  
Sbjct: 316 YEEICAPRVEEFCFITDNTYTKAEVLKMESQLLNDLGFNLSVPTTKTFLRRFLRAAQASR 375

Query: 363 K 365
           K
Sbjct: 376 K 376


>ref|NP_001147088.1| cyclin-A2 [Zea mays] gi|195607136|gb|ACG25398.1| cyclin-A2 [Zea
           mays]
          Length = 489

 Score =  167 bits (423), Expect = 8e-40
 Identities = 87/121 (71%), Positives = 97/121 (80%)
 Frame = +3

Query: 3   LVEVSEEYKLVPDTLYLTVHLIDLFLSEHYIEKKRLQLLGITCMLIASHKLLFLSMV*RK 182
           LVEVSEEYKLVPDTLYLTV+LID FLS +YIE++RLQL+GIT ML+AS           K
Sbjct: 267 LVEVSEEYKLVPDTLYLTVYLIDRFLSRNYIERQRLQLVGITSMLVAS-----------K 315

Query: 183 YEEICAPRIEELCFITDNTYTKTEVLTMESKVLKDLRFQLSAPTAKTFLRRYLRAAQACN 362
           YEEICAPR+EE CFITDNTYTK EVL MES++L DL F LS PT KTFLRR+LRAAQA  
Sbjct: 316 YEEICAPRVEEFCFITDNTYTKAEVLKMESQLLNDLGFNLSVPTTKTFLRRFLRAAQASR 375

Query: 363 K 365
           K
Sbjct: 376 K 376


>ref|NP_001066828.1| Os12g0502300 [Oryza sativa Japonica Group]
           gi|122248577|sp|Q2QQ96.1|CCA21_ORYSJ RecName:
           Full=Cyclin-A2-1; AltName: Full=G2/mitotic-specific
           cyclin-A2-1; Short=CycA2;1 gi|77555843|gb|ABA98639.1|
           Cyclin, N-terminal domain containing protein, expressed
           [Oryza sativa Japonica Group]
           gi|113649335|dbj|BAF29847.1| Os12g0502300 [Oryza sativa
           Japonica Group]
          Length = 490

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/118 (72%), Positives = 95/118 (80%)
 Frame = +3

Query: 3   LVEVSEEYKLVPDTLYLTVHLIDLFLSEHYIEKKRLQLLGITCMLIASHKLLFLSMV*RK 182
           LVEVSEEYKLVPDTLYLT++LID FLS+HYIE+++LQLLGIT MLIAS           K
Sbjct: 268 LVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIAS-----------K 316

Query: 183 YEEICAPRIEELCFITDNTYTKTEVLTMESKVLKDLRFQLSAPTAKTFLRRYLRAAQA 356
           YEEICAPR+EE CFITDNTYTK EVL ME  VL D+ F LS PT KTFLRR+LRAAQA
Sbjct: 317 YEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQA 374


>gb|EEE53262.1| hypothetical protein OsJ_36196 [Oryza sativa Japonica Group]
          Length = 522

 Score =  166 bits (421), Expect = 1e-39
 Identities = 86/118 (72%), Positives = 95/118 (80%)
 Frame = +3

Query: 3   LVEVSEEYKLVPDTLYLTVHLIDLFLSEHYIEKKRLQLLGITCMLIASHKLLFLSMV*RK 182
           LVEVSEEYKLVPDTLYLT++LID FLS+HYIE+++LQLLGIT MLIAS           K
Sbjct: 300 LVEVSEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIAS-----------K 348

Query: 183 YEEICAPRIEELCFITDNTYTKTEVLTMESKVLKDLRFQLSAPTAKTFLRRYLRAAQA 356
           YEEICAPR+EE CFITDNTYTK EVL ME  VL D+ F LS PT KTFLRR+LRAAQA
Sbjct: 349 YEEICAPRVEEFCFITDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQA 406


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