BLASTX nr result

ID: Bupleurum21_contig00024951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024951
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastig...   132   3e-29
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   132   4e-29
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   130   8e-29
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]   130   1e-28
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...   128   4e-28

>gb|ABM05483.1| LTR retrotransposon-like protein [Rhodiola fastigiata]
          Length = 383

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/117 (53%), Positives = 82/117 (70%)
 Frame = -1

Query: 353 YSNSSKIGKKVCKLIKTLYGLKQAPREWFDKLSSILKKAGFIQSNADSALFTKQEDGVFT 174
           +    K   KVCKL+K+LYGLKQAPR+WF + S  L K GF  S  D +LFT  +DGVF 
Sbjct: 16  FYKEEKAQGKVCKLLKSLYGLKQAPRQWFSRFSDALIKFGFTSSLNDYSLFTYNKDGVFL 75

Query: 173 AILAYVDDLILTGNSMQAIDDAKQFLNNQFRMKDLGELRYFLGIEVDKSDKGIFLSQ 3
           A+L YVDD+I+TG S   I   K ++++ FR+KDLG+LRYFLG E  +SD G+FL+Q
Sbjct: 76  ALLVYVDDVIITGTSHSLIQSVKSYIHDLFRIKDLGQLRYFLGFEAARSDAGLFLNQ 132


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/107 (57%), Positives = 83/107 (77%)
 Frame = -1

Query: 323  VCKLIKTLYGLKQAPREWFDKLSSILKKAGFIQSNADSALFTKQEDGVFTAILAYVDDLI 144
            VC+L K+LYGLKQA R+WF K S  ++ AG++QS AD +LFT+ +   FTA+L YVDD++
Sbjct: 1149 VCRLHKSLYGLKQASRQWFSKFSKAIQAAGYVQSRADYSLFTRIQGKSFTALLIYVDDIL 1208

Query: 143  LTGNSMQAIDDAKQFLNNQFRMKDLGELRYFLGIEVDKSDKGIFLSQ 3
            +TGN   +I   K+FL++QFR+KDLG+L+YFLGIEV  S  GIF+SQ
Sbjct: 1209 ITGNDSMSIAAIKKFLHSQFRLKDLGDLKYFLGIEVSSSKNGIFISQ 1255


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  130 bits (328), Expect = 8e-29
 Identities = 65/108 (60%), Positives = 83/108 (76%)
 Frame = -1

Query: 326  KVCKLIKTLYGLKQAPREWFDKLSSILKKAGFIQSNADSALFTKQEDGVFTAILAYVDDL 147
            +VCKL K+LYGLKQA R+WF KLSS LK AGF QS +D +LF +   G FT +L YVDD+
Sbjct: 1106 RVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDV 1165

Query: 146  ILTGNSMQAIDDAKQFLNNQFRMKDLGELRYFLGIEVDKSDKGIFLSQ 3
            IL GNS++ I + KQFL + F++KD+G+LRYFLGIEV +S +GI L Q
Sbjct: 1166 ILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQ 1213


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score =  130 bits (326), Expect = 1e-28
 Identities = 63/107 (58%), Positives = 83/107 (77%)
 Frame = -1

Query: 323  VCKLIKTLYGLKQAPREWFDKLSSILKKAGFIQSNADSALFTKQEDGVFTAILAYVDDLI 144
            VC L K+LYGLKQA R+WF K S+ ++  GFIQS AD +LFT ++   FTA+L YVDD++
Sbjct: 755  VCHLHKSLYGLKQASRQWFAKFSTAIQAVGFIQSKADYSLFTCRKGKSFTALLIYVDDIL 814

Query: 143  LTGNSMQAIDDAKQFLNNQFRMKDLGELRYFLGIEVDKSDKGIFLSQ 3
            +TGN + AI   KQFL++ FR+KDLG+L+YFLGIEV +S KGI +SQ
Sbjct: 815  ITGNDVNAIVALKQFLHSHFRIKDLGDLKYFLGIEVSRSKKGISISQ 861


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/108 (55%), Positives = 84/108 (77%)
 Frame = -1

Query: 326  KVCKLIKTLYGLKQAPREWFDKLSSILKKAGFIQSNADSALFTKQEDGVFTAILAYVDDL 147
            KVCKL K+LYGLKQA R+WF KLS+ L   G+  S+AD +LFTK  +  FTA+L YVD++
Sbjct: 1315 KVCKLHKSLYGLKQASRQWFSKLSTALISLGYSPSSADHSLFTKLHNSHFTALLVYVDNI 1374

Query: 146  ILTGNSMQAIDDAKQFLNNQFRMKDLGELRYFLGIEVDKSDKGIFLSQ 3
            +LTG+ +Q I   KQFL++ F++KD G+L+YFLG+E+ +S +GIFL+Q
Sbjct: 1375 VLTGDDLQEIQSVKQFLDSTFKIKDPGKLKYFLGLEIARSTQGIFLNQ 1422


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