BLASTX nr result

ID: Bupleurum21_contig00024934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024934
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512273.1| leucine-rich repeat-containing protein, puta...    83   6e-14
ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    83   6e-14
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    64   3e-08
ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus ...    64   4e-08

>ref|XP_002512273.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548234|gb|EEF49725.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1166

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 15/180 (8%)
 Frame = -1

Query: 684  FKSVTLQNADEQITRSLGFSNLEFEEDI-------------ITEIRVRYEFGIFSIVYPG 544
            FK   + N D+++   LG  NL   E I             IT  +V +E GI SI  PG
Sbjct: 919  FKLEPINNHDKEMANMLGLFNLGPVETIKVEMFSVMTMTSRITPPKVLHECGICSIFLPG 978

Query: 543  AELPGQYXXXXXXXXXXXWTVPSLSKDTRIRGLNVCFVYAYKS-RDFMLWRPTSKLSNKT 367
            +E+PG Y              PS  +  ++ GLN+C VY     R+ +      K+ NKT
Sbjct: 979  SEVPGWYSPQNEGPLISFTMPPSHVR--KVCGLNICIVYTCNDVRNGLTDHHYIKIWNKT 1036

Query: 366  KDLTWRYTPAVLSFKEYDGDLVMLCHWKLGNLLDDGDEITFE-ITNWWVRVKELGIKIVY 190
            KDL W Y+P      E +  ++ L HWKL +LL+ GD++    + +   + K + I +VY
Sbjct: 1037 KDLKWTYSPIFYGIPEPEKSMLWLSHWKLEDLLEGGDQLNVSAVMSTGYQAKNIRIHLVY 1096


>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 10/160 (6%)
 Frame = -1

Query: 639 SLGFSNLEFEEDI-----ITEIRVRYEFGIFSIVYPGAELPGQYXXXXXXXXXXXWTVPS 475
           SLG   +E    I     IT +++  E GIFSI  PG+E+P  Y              P 
Sbjct: 253 SLGSIEVEMINSITKTSRITRLQILQEQGIFSIFLPGSEVPSWYSHQKQNNSVSFAVPPL 312

Query: 474 LSKDTRIRGLNVCFVYAYKSRD---FMLWRPTSKLSNKTKDLTWRYTPAVLSFKEYDGDL 304
            S+  +IRGLN+C VY  ++ D     L+ P +++SNKTK L W Y P V    +   D+
Sbjct: 313 PSR--KIRGLNLCIVYGLRNTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDM 370

Query: 303 VMLCHWKLG-NLLDDGDEITFEIT-NWWVRVKELGIKIVY 190
           + L HW+ G + L+ GD++    +     +VK+ G+ +VY
Sbjct: 371 LWLSHWRFGTDQLEVGDQVNVSASVTPDFQVKKCGVHLVY 410


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 4/137 (2%)
 Frame = -1

Query: 588  RVRYEFGIFSIVYPGAELPGQYXXXXXXXXXXXWTVPSLSKDTRIRGLNVCFVYAYKSRD 409
            +V  E GI S    G E+P  +           +T+  LS D +IRGLN+C VYA     
Sbjct: 886  QVLQECGIVSFFLAGNEVP-HWFDHKSTGSSLSFTINPLS-DYKIRGLNLCTVYARDHEV 943

Query: 408  FMLWRP--TSKLSNKTKDLTWRYTPAVLSFKEYDG-DLVMLCHWKLGNLLDDGDEITFEI 238
            + L      ++++N+TK   W Y+P   +  E D  D++ L +WK G   + GD++   +
Sbjct: 944  YWLHAAGHYARMNNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGGEFEVGDKVNVSV 1003

Query: 237  -TNWWVRVKELGIKIVY 190
               +   VKE GI+IVY
Sbjct: 1004 RMPFGYYVKECGIRIVY 1020


>ref|XP_002517696.1| TMV resistance protein N, putative [Ricinus communis]
            gi|223543328|gb|EEF44860.1| TMV resistance protein N,
            putative [Ricinus communis]
          Length = 1186

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 17/182 (9%)
 Frame = -1

Query: 684  FKSVTLQNADEQITRSLGFSNLEFEE-------------DIITEIRVRYEFGIFSIVYPG 544
            FK   + N + QI +S+G  NLE  +             ++ T I+V  E GIFSI  PG
Sbjct: 930  FKLEPVGNINTQILKSVGLINLESLKGVEVEMFNALACTEMRTSIQVLQECGIFSIFLPG 989

Query: 543  AELPGQYXXXXXXXXXXXWTVPSLSKDTRIRGLNVCFVYAYKSRDF--MLWRPTSKLSNK 370
              +P  +                     +I+GL++C +Y Y   +    +    +K++NK
Sbjct: 990  NTIPEWFNQRSESSSISFEV--EAKPGHKIKGLSLCTLYTYDKLEGGGYIDENCAKINNK 1047

Query: 369  TKDLTWRYTPAVLSFKEYDGDLVMLCHWKLGNLLDDGDE--ITFEITNWWVRVKELGIKI 196
            T    W Y+P      +   +++ L HW  G+ L+ GDE  I  E+ +  + VK+ GI++
Sbjct: 1048 TICEKWTYSPTFYGMPKPLEEMLWLSHWTFGDQLEVGDEVHILVEMAS-GLTVKKCGIRL 1106

Query: 195  VY 190
            +Y
Sbjct: 1107 IY 1108


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