BLASTX nr result

ID: Bupleurum21_contig00024932 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024932
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]                189   2e-46
ref|XP_002534707.1| DNA binding protein, putative [Ricinus commu...   180   9e-44
gb|AAG44394.1| unknown [Hevea brasiliensis]                           178   4e-43
gb|ABC55648.1| MYB transcription factor [Hevea brasiliensis]          178   4e-43
gb|AAU06309.1| MYB transcription factor [Hevea brasiliensis]          178   4e-43

>gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]
          Length = 318

 Score =  189 bits (481), Expect = 2e-46
 Identities = 97/141 (68%), Positives = 112/141 (79%), Gaps = 5/141 (3%)
 Frame = +2

Query: 26  NQGIEILSRT----NSNWLFE-SKETTWSLEENKQFEDALALFDKDTPDRWYNIAAMVPG 190
           N+G+EILS      NSNWLFE +KET W+ EENK+FE+ALALFDKDTPDRWYN+AAM+PG
Sbjct: 8   NRGMEILSPASYLRNSNWLFEEAKETKWTSEENKRFENALALFDKDTPDRWYNVAAMIPG 67

Query: 191 KTVNDVIKQYKALEEDVSVIEAGLFPVPDYATDHCFGLEWIKNQGGFDGMEQFYVPGGKR 370
           KTV DVIKQY+ LEEDVS IEAGL P+P Y T   F LEW+ NQ  F G++QFY PG KR
Sbjct: 68  KTVRDVIKQYRELEEDVSDIEAGLIPIPGYTTSDSFTLEWMNNQ-EFHGLKQFYGPGLKR 126

Query: 371 SLSGQPCDQAEKKKGVPWTEE 433
           S S +P DQ E+KKGVPWTEE
Sbjct: 127 SSSTRPSDQ-ERKKGVPWTEE 146


>ref|XP_002534707.1| DNA binding protein, putative [Ricinus communis]
           gi|223524722|gb|EEF27676.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score =  180 bits (457), Expect = 9e-44
 Identities = 89/143 (62%), Positives = 110/143 (76%), Gaps = 6/143 (4%)
 Frame = +2

Query: 23  MNQGIEILSRT----NSNWLF-ESKETTWSLEENKQFEDALALFDKDTPDRWYNIAAMVP 187
           MNQG+EILS      NSNWLF ES+ T W+ EENK+FE+ALALFDKD PDRW  +AA++P
Sbjct: 1   MNQGLEILSPASYLENSNWLFQESRGTKWTPEENKRFENALALFDKDEPDRWQKVAALIP 60

Query: 188 GKTVNDVIKQYKALEEDVSVIEAGLFPVPDY-ATDHCFGLEWIKNQGGFDGMEQFYVPGG 364
           GKTV DVIKQY+ LEEDVS IEAGL P+P Y ++   F LEW+    G+DG +Q+Y PGG
Sbjct: 61  GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYSSSSDSFTLEWVNGNQGYDGFKQYYTPGG 120

Query: 365 KRSLSGQPCDQAEKKKGVPWTEE 433
           KR+ + +P +Q E+KKGVPWTEE
Sbjct: 121 KRTTATRPSEQ-ERKKGVPWTEE 142


>gb|AAG44394.1| unknown [Hevea brasiliensis]
          Length = 310

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/142 (60%), Positives = 107/142 (75%), Gaps = 5/142 (3%)
 Frame = +2

Query: 23  MNQGIEILSRT----NSNWLF-ESKETTWSLEENKQFEDALALFDKDTPDRWYNIAAMVP 187
           M++GIEILS      NSNWLF E++ T W+ EENKQFE+ALAL+DKD PDRW  +AA++P
Sbjct: 1   MDRGIEILSPASYLQNSNWLFPETRATKWTPEENKQFENALALYDKDEPDRWQKVAAVIP 60

Query: 188 GKTVNDVIKQYKALEEDVSVIEAGLFPVPDYATDHCFGLEWIKNQGGFDGMEQFYVPGGK 367
           GKTV DVIKQY+ LEEDVS IEAGL P+P Y++   F LEW  N  G+DG   +Y PGGK
Sbjct: 61  GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYSSSDAFTLEWFNNNQGYDGFRHYYTPGGK 120

Query: 368 RSLSGQPCDQAEKKKGVPWTEE 433
           R+ + +  +Q E+KKGVPWTEE
Sbjct: 121 RTTAARSSEQ-ERKKGVPWTEE 141


>gb|ABC55648.1| MYB transcription factor [Hevea brasiliensis]
          Length = 310

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/142 (60%), Positives = 107/142 (75%), Gaps = 5/142 (3%)
 Frame = +2

Query: 23  MNQGIEILSRT----NSNWLF-ESKETTWSLEENKQFEDALALFDKDTPDRWYNIAAMVP 187
           M++GIEILS      NSNWLF E++ T W+ EENKQFE+ALAL+DKD PDRW  +AA++P
Sbjct: 1   MDRGIEILSPASYLQNSNWLFPETRATKWTPEENKQFENALALYDKDEPDRWQKVAAVIP 60

Query: 188 GKTVNDVIKQYKALEEDVSVIEAGLFPVPDYATDHCFGLEWIKNQGGFDGMEQFYVPGGK 367
           GKTV DVIKQY+ LEEDVS IEAGL P+P Y++   F LEW  N  G+DG   +Y PGGK
Sbjct: 61  GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYSSSDAFTLEWFNNNQGYDGFRHYYTPGGK 120

Query: 368 RSLSGQPCDQAEKKKGVPWTEE 433
           R+ + +  +Q E+KKGVPWTEE
Sbjct: 121 RTTAARSSEQ-ERKKGVPWTEE 141


>gb|AAU06309.1| MYB transcription factor [Hevea brasiliensis]
          Length = 310

 Score =  178 bits (452), Expect = 4e-43
 Identities = 86/142 (60%), Positives = 107/142 (75%), Gaps = 5/142 (3%)
 Frame = +2

Query: 23  MNQGIEILSRT----NSNWLF-ESKETTWSLEENKQFEDALALFDKDTPDRWYNIAAMVP 187
           M++GIEILS      NSNWLF E++ T W+ EENKQFE+ALAL+DKD PDRW  +AA++P
Sbjct: 1   MDRGIEILSPASYLQNSNWLFPETRATKWTPEENKQFENALALYDKDEPDRWQRVAAVIP 60

Query: 188 GKTVNDVIKQYKALEEDVSVIEAGLFPVPDYATDHCFGLEWIKNQGGFDGMEQFYVPGGK 367
           GKTV DVIKQY+ LEEDVS IEAGL P+P Y++   F LEW  N  G+DG   +Y PGGK
Sbjct: 61  GKTVGDVIKQYRELEEDVSDIEAGLIPIPGYSSSDAFTLEWFNNNQGYDGFRHYYTPGGK 120

Query: 368 RSLSGQPCDQAEKKKGVPWTEE 433
           R+ + +  +Q E+KKGVPWTEE
Sbjct: 121 RTTAARSSEQ-ERKKGVPWTEE 141


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